Class information for:
Level 1: SIGNAL RECOGNITION PARTICLE//TRANSLOCON//FFH

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
4955 1697 44.3 87%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
892 2             PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA 11392
4955 1                   SIGNAL RECOGNITION PARTICLE//TRANSLOCON//FFH 1697

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SIGNAL RECOGNITION PARTICLE authKW 1298939 7% 63% 114
2 TRANSLOCON authKW 316379 3% 37% 48
3 FFH authKW 307013 1% 74% 23
4 SRP authKW 302025 3% 34% 49
5 SEC61 authKW 296082 1% 69% 24
6 FTSY authKW 283364 1% 75% 21
7 SRP RECEPTOR authKW 259979 1% 85% 17
8 SRP RNA authKW 185594 1% 74% 14
9 PROTEIN TRANSLOCATION authKW 171014 4% 13% 72
10 GET PATHWAY authKW 161928 1% 100% 9

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Cell Biology 13494 46% 0% 773
2 Biochemistry & Molecular Biology 12591 69% 0% 1179
3 Biophysics 1230 11% 0% 181
4 Microbiology 108 5% 0% 82
5 Biology 74 3% 0% 44
6 Mycology 64 1% 0% 16
7 Biochemical Research Methods 41 3% 0% 45
8 Developmental Biology 16 1% 0% 17
9 Genetics & Heredity 2 2% 0% 35
10 CYTOLOGY & HISTOLOGY 1 0% 0% 1

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CSCM 80961 0% 75% 6
2 NAT SCI TECHNOL 8 71968 0% 100% 4
3 NORTHWEST S 40475 0% 38% 6
4 ABT BIOCHEM 3 17992 0% 100% 1
5 ABT H0400 17992 0% 100% 1
6 BATIMENT 142 17992 0% 100% 1
7 BCD ND 17992 0% 100% 1
8 BIOL BIOTECHNOL AGRARIA 17992 0% 100% 1
9 BIOL MOLHIGASHI KU 17992 0% 100% 1
10 BIOPHYS SCI LIFE 17992 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF CELL BIOLOGY 16451 7% 1% 121
2 CELL 7419 5% 1% 79
3 MOLECULAR BIOLOGY OF THE CELL 6000 3% 1% 53
4 EMBO JOURNAL 4497 4% 0% 66
5 JOURNAL OF BIOLOGICAL CHEMISTRY 4270 11% 0% 194
6 RNA-A PUBLICATION OF THE RNA SOCIETY 3592 1% 1% 16
7 NATURE STRUCTURAL & MOLECULAR BIOLOGY 2972 1% 1% 19
8 ENDOCYTOBIOSIS AND CELL RESEARCH 2538 0% 2% 6
9 ANNUAL REVIEW OF CELL BIOLOGY 1548 0% 2% 4
10 JOURNAL OF CELL SCIENCE 1449 2% 0% 33

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SIGNAL RECOGNITION PARTICLE 1298939 7% 63% 114 Search SIGNAL+RECOGNITION+PARTICLE Search SIGNAL+RECOGNITION+PARTICLE
2 TRANSLOCON 316379 3% 37% 48 Search TRANSLOCON Search TRANSLOCON
3 FFH 307013 1% 74% 23 Search FFH Search FFH
4 SRP 302025 3% 34% 49 Search SRP Search SRP
5 SEC61 296082 1% 69% 24 Search SEC61 Search SEC61
6 FTSY 283364 1% 75% 21 Search FTSY Search FTSY
7 SRP RECEPTOR 259979 1% 85% 17 Search SRP+RECEPTOR Search SRP+RECEPTOR
8 SRP RNA 185594 1% 74% 14 Search SRP+RNA Search SRP+RNA
9 PROTEIN TRANSLOCATION 171014 4% 13% 72 Search PROTEIN+TRANSLOCATION Search PROTEIN+TRANSLOCATION
10 GET PATHWAY 161928 1% 100% 9 Search GET+PATHWAY Search GET+PATHWAY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 AKOPIAN, D , SHEN, K , ZHANG, X , SHAN, SO , (2013) SIGNAL RECOGNITION PARTICLE: AN ESSENTIAL PROTEIN-TARGETING MACHINE.ANNUAL REVIEW OF BIOCHEMISTRY, VOL 82. VOL. 82. ISSUE . P. 693-721 144 66% 90
2 DENKS, K , VOGT, A , SACHELARU, I , PETRIMAN, NA , KUDVA, R , KOCH, HG , (2014) THE SEC TRANSLOCON MEDIATED PROTEIN TRANSPORT IN PROKARYOTES AND EUKARYOTES.MOLECULAR MEMBRANE BIOLOGY. VOL. 31. ISSUE 2-3. P. 58 -84 208 51% 28
3 MANDON, EC , TRUEMAN, SF , GILMORE, R , (2013) PROTEIN TRANSLOCATION ACROSS THE ROUGH ENDOPLASMIC RETICULUM.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 5. ISSUE 2. P. - 132 91% 3
4 NYATHI, Y , WILKINSON, BM , POOL, MR , (2013) CO-TRANSLATIONAL TARGETING AND TRANSLOCATION OF PROTEINS TO THE ENDOPLASMIC RETICULUM.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1833. ISSUE 11. P. 2392-2402 113 84% 37
5 DUDEK, J , PFEFFER, S , LEE, PH , JUNG, M , CAVALIE, A , HELMS, V , FORSTER, F , ZIMMERMANN, R , (2015) PROTEIN TRANSPORT INTO THE HUMAN ENDOPLASMIC RETICULUM.JOURNAL OF MOLECULAR BIOLOGY. VOL. 427. ISSUE 6. P. 1159 -1175 124 75% 6
6 AVIRAM, N , SCHULDINER, M , (2014) EMBRACING THE VOID-HOW MUCH DO WE REALLY KNOW ABOUT TARGETING AND TRANSLOCATION TO THE ENDOPLASMIC RETICULUM?.CURRENT OPINION IN CELL BIOLOGY. VOL. 29. ISSUE . P. 8 -17 97 94% 11
7 HEGDE, RS , SHAO, SC , (2011) MEMBRANE PROTEIN INSERTION AT THE ENDOPLASMIC RETICULUM.ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 27. VOL. 27. ISSUE . P. 25 -56 115 67% 81
8 BIBI, E , (2011) EARLY TARGETING EVENTS DURING MEMBRANE PROTEIN BIOGENESIS IN ESCHERICHIA COLI.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1808. ISSUE 3. P. 841-850 114 78% 20
9 KOCH, HG , MOSER, M , MULLER, M , (2003) SIGNAL RECOGNITION PARTICLE-DEPENDENT PROTEIN TARGETING, UNIVERSAL TO ALL KINGDOMS OF LIFE.REVIEWS OF PHYSIOLOGY, BIOCHEMISTRY AND PHARMACOLOGY, VOL 146. VOL. 146. ISSUE . P. 55-94 161 61% 90
10 LUIRINK, J , SINNING, I , (2004) SRP-MEDIATED PROTEIN TARGETING: STRUCTURE AND FUNCTION REVISITED.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1694. ISSUE 1-3. P. 17-35 118 72% 120

Classes with closest relation at Level 1


Rank Class id link
1 2349 SECA//SECB//SECYEG
2 24205 TRIGGER FACTOR//COTRANSLATIONAL FOLDING//NASCENT CHAIN
3 30868 NASCENT POLYPEPTIDE ASSOCIATED COMPLEX//ALPHA NAC//FIAT
4 9219 CHLOROPLAST PROTEIN IMPORT//PROTEIN IMPORT//CHLOROPLAST
5 4131 TRANSMEMBRANE HELIX//TRANSMEMBRANE HELICES//MEMBRANE PROTEIN
6 6152 DNAJ//DNAK//GRPE
7 5128 ERAD//VALOSIN CONTAINING PROTEIN//P97
8 2667 PROTEIN IMPORT//TOM COMPLEX//MITOCHONDRIAL PROTEIN IMPORT
9 27992 CYSTEINE STRING PROTEIN//CSP ALPHA//SGTA
10 34724 POLYUNSATURATED FREE FATTY ACID//2 2 DISULFONIC ACID//4 4 DINITROSTILBENE

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