Class information for:
Level 1: ERAD//VALOSIN CONTAINING PROTEIN//P97

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5128 1669 53.3 94%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
204 3       PROTEASOME//UBIQUITIN//UNFOLDED PROTEIN RESPONSE 52492
677 2             PROTEASOME//UBIQUITIN//PROTEASOME INHIBITOR 13186
5128 1                   ERAD//VALOSIN CONTAINING PROTEIN//P97 1669

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ERAD authKW 1185728 8% 48% 134
2 VALOSIN CONTAINING PROTEIN authKW 715551 3% 67% 58
3 P97 authKW 693198 4% 63% 60
4 CDC48 authKW 535077 2% 75% 39
5 VCP authKW 494042 3% 49% 55
6 HRD1 authKW 384613 2% 73% 29
7 ER ASSOCIATED DEGRADATION authKW 337253 3% 42% 44
8 IBMPFD authKW 329278 1% 75% 24
9 SEL1L authKW 257256 1% 94% 15
10 PEPTIDE N GLYCANASE authKW 237079 1% 72% 18

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 12934 45% 0% 751
2 Biochemistry & Molecular Biology 8224 58% 0% 962
3 Biophysics 1018 10% 0% 165
4 Genetics & Heredity 155 5% 0% 91
5 Developmental Biology 90 2% 0% 31
6 Oncology 23 4% 0% 71
7 Biochemical Research Methods 19 2% 0% 36
8 Clinical Neurology 16 3% 0% 51
9 Microscopy 5 0% 0% 5
10 Neurosciences 4 4% 0% 64

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GEORGE WISE LIFE SCI 44604 1% 24% 10
2 GLYCOMETABOLOME TEAM 37340 0% 29% 7
3 SYST GLYCOBIOL GRPGLYCOMETABOLOME TEAM 36588 0% 100% 2
4 ERYTHROCRINE PROJECT TRANSLAT MED 24391 0% 67% 2
5 EXCELLENCE PROGRAM 21 24391 0% 67% 2
6 PEDIAT P SCI 23511 0% 21% 6
7 GENET METAB 20591 1% 5% 23
8 BIOSTUDIES SOLUT ORIENTED SCI TE 20577 0% 38% 3
9 AGE RELATED DIS GRP 18294 0% 100% 1
10 AGING GERIATR BIOMED SCI 18294 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR BIOLOGY OF THE CELL 17329 5% 1% 89
2 JOURNAL OF BIOLOGICAL CHEMISTRY 6764 14% 0% 240
3 MOLECULAR CELL 6429 3% 1% 44
4 JOURNAL OF CELL BIOLOGY 3524 3% 0% 56
5 NATURE CELL BIOLOGY 3253 1% 1% 22
6 EMBO JOURNAL 1822 3% 0% 42
7 SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY 1779 1% 1% 14
8 GLYCOBIOLOGY 1621 1% 1% 16
9 JOURNAL OF CELL SCIENCE 1384 2% 0% 32
10 GENES TO CELLS 1355 1% 1% 12

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ERAD 1185728 8% 48% 134 Search ERAD Search ERAD
2 VALOSIN CONTAINING PROTEIN 715551 3% 67% 58 Search VALOSIN+CONTAINING+PROTEIN Search VALOSIN+CONTAINING+PROTEIN
3 P97 693198 4% 63% 60 Search P97 Search P97
4 CDC48 535077 2% 75% 39 Search CDC48 Search CDC48
5 VCP 494042 3% 49% 55 Search VCP Search VCP
6 HRD1 384613 2% 73% 29 Search HRD1 Search HRD1
7 ER ASSOCIATED DEGRADATION 337253 3% 42% 44 Search ER+ASSOCIATED+DEGRADATION Search ER+ASSOCIATED+DEGRADATION
8 IBMPFD 329278 1% 75% 24 Search IBMPFD Search IBMPFD
9 SEL1L 257256 1% 94% 15 Search SEL1L Search SEL1L
10 PEPTIDE N GLYCANASE 237079 1% 72% 18 Search PEPTIDE+N+GLYCANASE Search PEPTIDE+N+GLYCANASE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 XIA, D , TANG, WK , YE, YH , (2016) STRUCTURE AND FUNCTION OF THE AAA + ATPASE P97/CDC48P.GENE. VOL. 583. ISSUE 1. P. 64 -77 127 88% 10
2 WOLF, DH , STOLZ, A , (2012) THE CDC48 MACHINE IN ENDOPLASMIC RETICULUM ASSOCIATED PROTEIN DEGRADATION.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1823. ISSUE 1. P. 117 -124 116 86% 69
3 MEYER, H , BUG, M , BREMER, S , (2012) EMERGING FUNCTIONS OF THE VCP/P97 AAA-ATPASE IN THE UBIQUITIN SYSTEM.NATURE CELL BIOLOGY. VOL. 14. ISSUE 2. P. 117-123 77 82% 253
4 RUGGIANO, A , FORESTI, O , CARVALHO, P , (2014) ER-ASSOCIATED DEGRADATION: PROTEIN QUALITY CONTROL AND BEYOND.JOURNAL OF CELL BIOLOGY. VOL. 204. ISSUE 6. P. 868-878 82 76% 110
5 BUCHBERGER, A , SCHINDELIN, H , HANZELMANN, P , (2015) CONTROL OF P97 FUNCTION BY COFACTOR BINDING.FEBS LETTERS. VOL. 589. ISSUE 19. P. 2578 -2589 93 83% 17
6 CHRISTIANSON, JC , YE, YH , (2014) CLEANING UP IN THE ENDOPLASMIC RETICULUM: UBIQUITIN IN CHARGE.NATURE STRUCTURAL & MOLECULAR BIOLOGY. VOL. 21. ISSUE 4. P. 325-335 88 68% 68
7 VEMBAR, SS , BRODSKY, JL , (2008) ONE STEP AT A TIME: ENDOPLASMIC RETICULUM-ASSOCIATED DEGRADATION.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 9. ISSUE 12. P. 944 -U30 89 57% 659
8 BAGOLA, K , MEHNERT, M , JAROSCH, E , SOMMER, T , (2011) PROTEIN DISLOCATION FROM THE ER.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1808. ISSUE 3. P. 925 -936 103 75% 62
9 THIBAULT, G , NG, DTW , (2012) THE ENDOPLASMIC RETICULUM-ASSOCIATED DEGRADATION PATHWAYS OF BUDDING YEAST.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 4. ISSUE 12. P. - 119 73% 12
10 NAKATSUKASA, K , BRODSKY, JL , (2008) THE RECOGNITION AND RETROTRANSLOCATION OF MISFOLDED PROTEINS FROM THE ENDOPLASMIC RETICULUM.TRAFFIC. VOL. 9. ISSUE 6. P. 861 -870 93 74% 170

Classes with closest relation at Level 1


Rank Class id link
1 11194 ALPHA MANNOSIDASE//GLUCOSIDASE II//FREE N GLYCAN
2 31233 BZIP28//MEMBRANE ASSOCIATED TRANSCRIPTION FACTOR//BZIP60
3 35314 UBIQUILIN//UBIQUILIN 1//UBQLN1
4 3837 DEUBIQUITINATING ENZYME//UBIQUITIN//DEUBIQUITINASE
5 30920 PHARMACOPERONE//ER EXPORT MOTIF//EXPORT TRAFFICKING
6 1429 PROTEASOME//MULTICATALYTIC PROTEINASE//IMMUNOPROTEASOME
7 415 UNFOLDED PROTEIN RESPONSE//ENDOPLASMIC RETICULUM STRESS//ER STRESS
8 12856 CALRETICULIN//CALNEXIN//CALNEXIN HOMOLOGUE
9 7695 PROTEIN DISULFIDE ISOMERASE//PROTEIN DISULPHIDE ISOMERASE//ERP29
10 4955 SIGNAL RECOGNITION PARTICLE//TRANSLOCON//FFH

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