Class information for:
Level 1: SINGLE CELL RNA SEQ//SINGLE CELL RNA SEQUENCING//SINGLE CELL TRANSCRIPTOMICS

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
563 3       REFERENCE GENES//CYTOMETRY//ANTIGEN RETRIEVAL 17825
2838 2             LOOP MEDIATED ISOTHERMAL AMPLIFICATION//LAMP//WHOLE GENOME AMPLIFICATION 3214
17262 1                   SINGLE CELL RNA SEQ//SINGLE CELL RNA SEQUENCING//SINGLE CELL TRANSCRIPTOMICS 636

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 SINGLE CELL RNA SEQ authKW 409153 3% 49% 17
2 SINGLE CELL RNA SEQUENCING authKW 308751 1% 69% 9
3 SINGLE CELL TRANSCRIPTOMICS authKW 250857 1% 56% 9
4 SINGLE CELL TRANSCRIPTOME SEQUENCING authKW 148660 0% 100% 3
5 UMI authKW 148660 0% 100% 3
6 SINGLE CELL BIOLOGY authKW 142822 1% 41% 7
7 SINGLE CELL authKW 120972 6% 6% 40
8 SINGLE CELL GENE EXPRESSION PROFILING authKW 111494 0% 75% 3
9 DROP SEQ authKW 99107 0% 100% 2
10 MARS SEQ authKW 99107 0% 100% 2

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemical Research Methods 7491 36% 0% 230
2 Biotechnology & Applied Microbiology 3769 33% 0% 210
3 Mathematical & Computational Biology 2168 11% 0% 70
4 Genetics & Heredity 1586 22% 0% 137
5 Cell Biology 1205 23% 0% 149
6 Biochemistry & Molecular Biology 573 28% 0% 176
7 Cell & Tissue Engineering 192 2% 0% 11
8 Multidisciplinary Sciences 110 3% 0% 16
9 Chemistry, Analytical 101 7% 0% 44
10 Developmental Biology 97 3% 0% 18

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PENN PROGRAM SINGLE CELL BIOL 99107 0% 100% 2
2 SANGER EBI 99107 0% 100% 2
3 UEA FLOW CYTOMETRY SERV 99107 0% 100% 2
4 EBI SINGLE CELL GENOM 99103 1% 50% 4
5 SINGLE CELL GENOM 72866 1% 29% 5
6 SINGLE CELL PROTE PROJECT 66070 0% 67% 2
7 UCLA CALTECH MED SCIENTIST TRAINING PROGRAM 66070 0% 67% 2
8 BIOSIGNATU DISCOVERY AUTOMAT 53739 1% 14% 8
9 BIOL COMP INFORMAT SCI 49553 0% 100% 1
10 BIOL MOL EUCARYOTES LBME 49553 0% 100% 1

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 NATURE METHODS 44389 6% 2% 40
2 GENOME BIOLOGY 23082 6% 1% 38
3 CELL SYSTEMS 7235 1% 3% 5
4 NATURE BIOTECHNOLOGY 6632 3% 1% 19
5 BIOINFORMATICS 5059 5% 0% 34
6 NATURE PROTOCOLS 4009 2% 1% 14
7 GENOME RESEARCH 1765 2% 0% 11
8 LAB ON A CHIP 1530 2% 0% 13
9 CELL REPORTS 1501 2% 0% 11
10 NATURE REVIEWS GENETICS 1464 1% 0% 6

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 SINGLE CELL RNA SEQ 409153 3% 49% 17 Search SINGLE+CELL+RNA+SEQ Search SINGLE+CELL+RNA+SEQ
2 SINGLE CELL RNA SEQUENCING 308751 1% 69% 9 Search SINGLE+CELL+RNA+SEQUENCING Search SINGLE+CELL+RNA+SEQUENCING
3 SINGLE CELL TRANSCRIPTOMICS 250857 1% 56% 9 Search SINGLE+CELL+TRANSCRIPTOMICS Search SINGLE+CELL+TRANSCRIPTOMICS
4 SINGLE CELL TRANSCRIPTOME SEQUENCING 148660 0% 100% 3 Search SINGLE+CELL+TRANSCRIPTOME+SEQUENCING Search SINGLE+CELL+TRANSCRIPTOME+SEQUENCING
5 UMI 148660 0% 100% 3 Search UMI Search UMI
6 SINGLE CELL BIOLOGY 142822 1% 41% 7 Search SINGLE+CELL+BIOLOGY Search SINGLE+CELL+BIOLOGY
7 SINGLE CELL 120972 6% 6% 40 Search SINGLE+CELL Search SINGLE+CELL
8 SINGLE CELL GENE EXPRESSION PROFILING 111494 0% 75% 3 Search SINGLE+CELL+GENE+EXPRESSION+PROFILING Search SINGLE+CELL+GENE+EXPRESSION+PROFILING
9 DROP SEQ 99107 0% 100% 2 Search DROP+SEQ Search DROP+SEQ
10 MARS SEQ 99107 0% 100% 2 Search MARS+SEQ Search MARS+SEQ

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 29109 NANOSYST BIOL CANC//SURPRISAL ANALYSIS//MICROPALLET ARRAYS
2 6435 RNA SEQ//TRANSCRIPTOME ASSEMBLY//DE NOVO ASSEMBLY
3 11049 EVOLUT CANC//INTRATUMOR HETEROGENEITY//CANCER EVOLUTION
4 14888 MASS CYTOMETRY//CYTOMETRY PART A//CYTOF
5 35939 P11//S100A10//RIBOTAG
6 33260 BIOCHEM MOL BIOPHYSZUCKERMAN MIND BRAIN B//BIOMED IBIMEDHLTH SCI PROGRAM//BREADTH OF EXPRESSION
7 24881 DIGITAL PCR//DROPLET DIGITAL PCR//DIGITAL ELISA
8 12184 LASER CAPTURE MICRODISSECTION//RNA AMPLIFICATION//LASER MICRODISSECTION
9 1618 CHEMICAL MASTER EQUATION//TAU LEAPING//STOCHASTIC GENE EXPRESSION
10 38607 MICROB DIS//ADAEQUATIO//CELL INTERACT GRP

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