Class information for:
Level 2: PHYTOCHROME//PHOTOMORPHOGENESIS//PHOTOTROPIN

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
9 4 PLANT SCIENCES//FOOD SCIENCE & TECHNOLOGY//AGRONOMY 1475572
41 3       PLANT SCIENCES//ARABIDOPSIS//PLANT CELL 105955
1982 2             PHYTOCHROME//PHOTOMORPHOGENESIS//PHOTOTROPIN 5973
2784 1                   PHYTOCHROME//PHOTOMORPHOGENESIS//PHYTOCHROME A 2179
12496 1                   PHYCOCYANOBILIN//PHYTOCHROME//CYANOBACTERIOCHROME 932
13543 1                   CHLOROPLAST MOVEMENT//PHOTOTROPIN//PHOTOTROPISM 860
13710 1                   LOV DOMAIN//BLUF//BLUF DOMAIN 848
16235 1                   TRIHELIX//GT 1//GT 2 692
20955 1                   PHOTOACTIVE YELLOW PROTEIN//PHOTOACTIVE YELLOW PROTEIN PYP//XANTHOPSINS 462

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PHYTOCHROME authKW 1455459 9% 49% 559
2 PHOTOMORPHOGENESIS authKW 548823 4% 44% 234
3 PHOTOTROPIN authKW 531668 2% 81% 125
4 CHLOROPLAST MOVEMENT authKW 352753 1% 81% 83
5 BLUE LIGHT authKW 229667 3% 24% 179
6 PHOTOTROPISM authKW 220780 2% 45% 94
7 PHOTOACTIVE YELLOW PROTEIN authKW 195791 1% 81% 46
8 LIGHT SIGNALING authKW 195126 1% 51% 73
9 PHYTOCHROME A authKW 185195 1% 68% 52
10 LOV DOMAIN authKW 182332 1% 79% 44

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Plant Sciences 73916 49% 1% 2909
2 Biochemistry & Molecular Biology 13250 40% 0% 2407
3 Biophysics 6159 12% 0% 741
4 Cell Biology 4554 16% 0% 939
5 Chemistry, Physical 228 8% 0% 452
6 Physics, Atomic, Molecular & Chemical 179 4% 0% 210
7 Developmental Biology 137 1% 0% 80
8 Genetics & Heredity 106 3% 0% 196
9 Biochemical Research Methods 91 2% 0% 138
10 Biology 32 1% 0% 84

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BIOL REGULAT PHOTOBIOL 76156 0% 76% 19
2 BIOL EXPT BIOPHYS 75395 0% 62% 23
3 LASER BIOCHEM 58021 0% 100% 11
4 PLANT GENE EXP S 52503 1% 15% 67
5 IFEVA 50418 1% 13% 72
6 PEKING YALE JOINT PLANT MOL GENET AGROBIOTE 48735 1% 25% 37
7 LASER BIOSCI 47949 0% 91% 10
8 BIOL BOT 2 46882 0% 34% 26
9 PLANT DEV MOL BIOL 30511 0% 64% 9
10 EXPT ANGEW PHYS 2 29652 0% 26% 22

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PHOTOCHEMISTRY AND PHOTOBIOLOGY 56876 5% 4% 303
2 PLANT CELL 46025 4% 4% 231
3 PLANT PHYSIOLOGY 43432 7% 2% 422
4 PLANTA 37755 4% 3% 253
5 PLANT AND CELL PHYSIOLOGY 29408 3% 3% 199
6 PLANT JOURNAL 25724 3% 3% 192
7 PLANT CELL AND ENVIRONMENT 22867 3% 3% 150
8 PLANT MOLECULAR BIOLOGY 13791 2% 2% 134
9 MOLECULAR PLANT 9396 1% 4% 43
10 PLANT SIGNALING & BEHAVIOR 9303 1% 3% 67

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PHYTOCHROME 1455459 9% 49% 559 Search PHYTOCHROME Search PHYTOCHROME
2 PHOTOMORPHOGENESIS 548823 4% 44% 234 Search PHOTOMORPHOGENESIS Search PHOTOMORPHOGENESIS
3 PHOTOTROPIN 531668 2% 81% 125 Search PHOTOTROPIN Search PHOTOTROPIN
4 CHLOROPLAST MOVEMENT 352753 1% 81% 83 Search CHLOROPLAST+MOVEMENT Search CHLOROPLAST+MOVEMENT
5 BLUE LIGHT 229667 3% 24% 179 Search BLUE+LIGHT Search BLUE+LIGHT
6 PHOTOTROPISM 220780 2% 45% 94 Search PHOTOTROPISM Search PHOTOTROPISM
7 PHOTOACTIVE YELLOW PROTEIN 195791 1% 81% 46 Search PHOTOACTIVE+YELLOW+PROTEIN Search PHOTOACTIVE+YELLOW+PROTEIN
8 LIGHT SIGNALING 195126 1% 51% 73 Search LIGHT+SIGNALING Search LIGHT+SIGNALING
9 PHYTOCHROME A 185195 1% 68% 52 Search PHYTOCHROME+A Search PHYTOCHROME+A
10 LOV DOMAIN 182332 1% 79% 44 Search LOV+DOMAIN Search LOV+DOMAIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 3282 BRASSINOSTEROIDS//BRASSINOLIDE//24 EPIBRASSINOLIDE
2 398 GRAVITROPISM//PLANT SCIENCES//XYLOGLUCAN
3 275 ARABIDOPSIS//PLANT SCIENCES//FLOWER DEVELOPMENT
4 2349 GIBBERELLIN//SOLID STATE FERMENTATION//GIBBERELLIN BIOSYNTHESIS
5 1196 CHALCONE SYNTHASE//UV B RADIATION//UV B
6 1878 GREENHOUSE//HORTICULTURE//LIGHT QUALITY
7 1191 PORPHYRIA//ACUTE INTERMITTENT PORPHYRIA//PORPHYRIA CUTANEA TARDA
8 3687 CEREBLON//PROTEIN KNOCKDOWN//BIMOLECULAR FLUORESCENCE COMPLEMENTATION
9 200 PLANT SCIENCES//ABIOTIC STRESS//SYSTEMIC ACQUIRED RESISTANCE
10 2748 CYTOKININ//GROWTH REGULATORS//CYTOKININ OXIDASE DEHYDROGENASE

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