Class information for:
Level 1: STANDARDS IN GENOMIC SCIENCES//BIOL DATA MANAGEMENT TECHNOL//GEBA

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
15359 717 31.9 78%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
126 2             MOLECULAR BIOLOGY AND EVOLUTION//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 23963
15359 1                   STANDARDS IN GENOMIC SCIENCES//BIOL DATA MANAGEMENT TECHNOL//GEBA 717

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 STANDARDS IN GENOMIC SCIENCES journal 6713367 45% 49% 325
2 BIOL DATA MANAGEMENT TECHNOL address 5098157 24% 69% 173
3 GEBA authKW 2986402 13% 75% 94
4 TAXONO GENOMICS authKW 1415171 5% 92% 36
5 NON MOTILE authKW 1197707 6% 63% 45
6 CHEMOORGANOTROPHIC authKW 1126346 5% 73% 36
7 MOTILE authKW 1060226 5% 66% 38
8 CULTUROMICS authKW 1042255 5% 64% 38
9 STRICTLY ANAEROBIC authKW 627174 3% 82% 18
10 ROOT NODULE BACTERIA authKW 543375 5% 36% 35

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 25162 77% 0% 552
2 Genetics & Heredity 11571 52% 0% 376
3 Biotechnology & Applied Microbiology 540 13% 0% 92
4 Mathematical & Computational Biology 117 3% 0% 19
5 Biochemical Research Methods 28 3% 0% 22
6 Infectious Diseases 1 1% 0% 9
7 Biochemistry & Molecular Biology 1 6% 0% 45
8 Evolutionary Biology 0 1% 0% 4
9 Virology 0 1% 0% 5
10 Gastroenterology & Hepatology 0 1% 0% 7

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOL DATA MANAGEMENT TECHNOL 5098157 24% 69% 173
2 AUSTRALIAN ECOGEN 455461 5% 28% 38
3 RHIZOBIUM STUDIES 337138 5% 23% 34
4 JOINT GENOME 325342 9% 12% 62
5 GENOME BIOL PROGRAM 313725 3% 39% 19
6 AUSTRALIAN ECOGENOM 279694 2% 39% 17
7 ALGORITHM BIOL 265322 3% 35% 18
8 THEODOSIUS DOBZHANSKY GENOME BIONFORMAT 247771 1% 73% 8
9 GENOME OURCE 229430 3% 28% 19
10 PLAGUE BRUCELLOSIS PREVENT CONTROL BASE 170341 1% 67% 6

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 STANDARDS IN GENOMIC SCIENCES 6713367 45% 49% 325
2 MARINE GENOMICS 48196 3% 5% 23
3 JOURNAL OF BACTERIOLOGY 22080 18% 0% 131
4 GUT PATHOGENS 7493 1% 3% 7
5 JOURNAL OF BIOTECHNOLOGY 7422 5% 1% 34
6 OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 4903 1% 1% 9
7 INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 2189 3% 0% 21
8 SYSTEMATIC AND APPLIED MICROBIOLOGY 610 1% 0% 6
9 VIROLOGICA SINICA 551 0% 1% 1
10 NUCLEIC ACIDS RESEARCH 534 3% 0% 23

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 GEBA 2986402 13% 75% 94 Search GEBA Search GEBA
2 TAXONO GENOMICS 1415171 5% 92% 36 Search TAXONO+GENOMICS Search TAXONO+GENOMICS
3 NON MOTILE 1197707 6% 63% 45 Search NON+MOTILE Search NON+MOTILE
4 CHEMOORGANOTROPHIC 1126346 5% 73% 36 Search CHEMOORGANOTROPHIC Search CHEMOORGANOTROPHIC
5 MOTILE 1060226 5% 66% 38 Search MOTILE Search MOTILE
6 CULTUROMICS 1042255 5% 64% 38 Search CULTUROMICS Search CULTUROMICS
7 STRICTLY ANAEROBIC 627174 3% 82% 18 Search STRICTLY+ANAEROBIC Search STRICTLY+ANAEROBIC
8 ROOT NODULE BACTERIA 543375 5% 36% 35 Search ROOT+NODULE+BACTERIA Search ROOT+NODULE+BACTERIA
9 ALPHAPROTEOBACTERIA 510976 6% 29% 42 Search ALPHAPROTEOBACTERIA Search ALPHAPROTEOBACTERIA
10 NON SPORULATING 438027 2% 86% 12 Search NON+SPORULATING Search NON+SPORULATING

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 ANGELAKIS, E , BIBI, F , RAMASAMY, D , AZHAR, EI , JIMAN-FATANI, AA , ABOUSHOUSHAH, SM , LAGIER, JC , ROBERT, C , CAPUTO, A , YASIR, M , ET AL (2014) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF CLOSTRIDIUM SAUDII SP NOV.STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 1. P. - 38 79% 0
2 LAGIER, JC , BIBI, F , RAMASAMY, D , AZHAR, EI , ROBERT, C , YASIR, M , JIMAN-FATANI, AA , ALSHALI, KZ , FOURNIER, PE , RAOULT, D , (2014) NON CONTIGUOUS-FINISHED GENOME SEQUENCE AND DESCRIPTION OF CLOSTRIDIUM JEDDAHENSE SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 37 80% 0
3 PADMANABHAN, R , DUBOURG, G , LAGIER, JC , NGUYEN, TT , COUDERC, C , ROSSI-TAMISIER, M , CAPUTO, A , RAOULT, D , FOURNIER, PE , (2014) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF COLLINSELLA MASSILIENSIS SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 37 74% 0
4 RAMASAMY, D , LAGIER, JC , ROSSI-, M , PFLEIDERER, TA , MICHELLE, C , COUDERC, C , RAOULT, D , FOURNIER, PE , (2014) GENOME SEQUENCE AND DESCRIPTION OF BACTEROIDES TIMONENSIS SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 39 70% 0
5 PADMANABHAN, R , LAGIER, JC , DANGUI, NPM , MICHELLE, C , COUDERC, C , RAOULT, D , FOURNIER, PE , (2013) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF MEGASPHAERA MASSILIENSIS SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 8. ISSUE 3. P. 525-538 33 79% 1
6 EDOUARD, S , SANKAR, S , DANGUI, NPM , LAGIER, JC , MICHELLE, C , RAOULT, D , FOURNIER, PE , (2014) GENOME SEQUENCE AND DESCRIPTION OF NESTERENKONIA MASSILIENSIS SP NOV STRAIN NP1(T).STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 36 69% 0
7 EDOUARD, S , BIBI, F , DHAMODHARAN, R , LAGIER, JC , AZHAR, EI , ROBERT, C , CAPUTO, A , YASIR, M , JIMAN-FATANI, AA , ALAWI, M , ET AL (2014) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF CORYNEBACTERIUM JEDDAHENSE SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 37 67% 0
8 MISHRA, AK , LAGIER, JC , PFLEIDERER, A , NGUYEN, TT , CAPUTO, A , RAOULT, D , FOURNIER, PE , (2013) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF HOLDEMANIA MASSILIENSIS SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 2. P. 395-409 30 81% 2
9 PFLEIDERER, A , MISHRA, AK , LAGIER, JC , ROBERT, C , CAPUTO, A , RAOULT, D , FOURNIER, PE , (2014) NON-CONTIGUOUS FINISHED GENOME SEQUENCE AND DESCRIPTION OF ALISTIPES IHUMII SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 30 77% 1
10 PADMANABHAN, R , DUBOURG, G , LAGIER, JC , COUDERC, C , MICHELLE, C , RAOULT, D , FOURNIER, PE , (2014) GENOME SEQUENCE AND DESCRIPTION OF CORYNEBACTERIUM IHUMII SP NOV..STANDARDS IN GENOMIC SCIENCES. VOL. 9. ISSUE 3. P. - 31 72% 0

Classes with closest relation at Level 1


Rank Class id link
1 27219 BACTERIOLOGICAL CODE//APPROVED LISTS OF BACTERIAL NAMES//SACCHAROMONOSPORA
2 20039 ORTHOLOGY//BIDIRECTIONAL BEST HIT//GENOME FUNCTIONAL PREDICTION
3 36483 GENOMIC DATA VISUALIZATION//ALTERNATE ASSEMBLIES OF COW GENOMES//BAC FISH MAPPING
4 23 INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY//YUNNAN MICROBIOL//POLYPHASIC TAXONOMY
5 34883 IKAITE//GLENDONITE//ALISHEWANELLA FETALIS GEN NOV SP NOV
6 22320 PLANCTOMYCETES//PLANCTOMYCETALES//RHODOPIRELLULA BALTICA
7 12821 LARIBACTER HONGKONGENSIS//PEPTOSTREPTOCOCCUS//ANAEROBIC COCCI
8 2013 GENOME ASSEMBLY//BIOINFORMATICS//VARIANT CALLING
9 11342 GENE PREDICTION//GENE FINDING//GENE RECOGNITION
10 6844 LATERAL GENE TRANSFER//TREE OF LIFE//HORIZONTAL GENE TRANSFER

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