Class information for:
Level 1: TMRNA//TRANS TRANSLATION//SMPB

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
18779 536 42.5 87%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
1297 2             RIBOSOME//TRANSLATION TERMINATION//TMRNA 8599
18779 1                   TMRNA//TRANS TRANSLATION//SMPB 536

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TMRNA authKW 4312489 17% 84% 90
2 TRANS TRANSLATION authKW 3937610 13% 96% 72
3 SMPB authKW 1958601 7% 90% 38
4 PEPTIDYL TRNA HYDROLASE authKW 1242258 5% 84% 26
5 10SA RNA authKW 1198799 4% 96% 22
6 ABCE1 authKW 802495 3% 78% 18
7 SSRA authKW 633208 3% 65% 17
8 PELOTA authKW 405103 1% 89% 8
9 ARFA authKW 256352 1% 75% 6
10 UP JE 2311 address 227867 1% 67% 6

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 4519 74% 0% 395
2 Cell Biology 952 23% 0% 122
3 Microbiology 879 18% 0% 96
4 Biophysics 313 10% 0% 52
5 Genetics & Heredity 94 7% 0% 37
6 Biochemical Research Methods 48 4% 0% 22
7 Developmental Biology 11 1% 0% 7
8 Crystallography 10 2% 0% 10
9 Andrology 3 0% 0% 1
10 Biology 1 1% 0% 6

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UP JE 2311 227867 1% 67% 6
2 UP JE2311 182295 1% 80% 4
3 UP JEUNE EQUIPE 2311IFR 97 170903 1% 100% 3
4 BIOCHIM PHARMACEUT 151904 1% 33% 8
5 UP JEUNE EQUIPE 2311 128176 1% 75% 3
6 EQUIPE STRUCT DYNAM MACROMOL 113936 0% 100% 2
7 ALTHOUSE 401 75956 0% 67% 2
8 ANTENNE CHIM SUBST NAT 75956 0% 67% 2
9 ADV PHOTON GENE 56968 0% 100% 1
10 BECKMAN B343 56968 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA 7257 3% 1% 18
2 RNA-A PUBLICATION OF THE RNA SOCIETY 5402 2% 1% 11
3 NUCLEIC ACIDS RESEARCH 2748 8% 0% 44
4 MOLECULAR MICROBIOLOGY 2293 4% 0% 22
5 BIOCHIMIE 1845 3% 0% 14
6 JOURNAL OF MOLECULAR BIOLOGY 1620 5% 0% 26
7 EMBO JOURNAL 1442 4% 0% 21
8 WILEY INTERDISCIPLINARY REVIEWS-RNA 1391 1% 1% 3
9 JOURNAL OF BACTERIOLOGY 1310 5% 0% 28
10 GENES TO CELLS 1062 1% 0% 6

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TMRNA 4312489 17% 84% 90 Search TMRNA Search TMRNA
2 TRANS TRANSLATION 3937610 13% 96% 72 Search TRANS+TRANSLATION Search TRANS+TRANSLATION
3 SMPB 1958601 7% 90% 38 Search SMPB Search SMPB
4 PEPTIDYL TRNA HYDROLASE 1242258 5% 84% 26 Search PEPTIDYL+TRNA+HYDROLASE Search PEPTIDYL+TRNA+HYDROLASE
5 10SA RNA 1198799 4% 96% 22 Search 10SA+RNA Search 10SA+RNA
6 ABCE1 802495 3% 78% 18 Search ABCE1 Search ABCE1
7 SSRA 633208 3% 65% 17 Search SSRA Search SSRA
8 PELOTA 405103 1% 89% 8 Search PELOTA Search PELOTA
9 ARFA 256352 1% 75% 6 Search ARFA Search ARFA
10 RIBOSOME RESCUE 203454 1% 71% 5 Search RIBOSOME+RESCUE Search RIBOSOME+RESCUE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 HIMENO, H , KURITA, D , MUTO, A , (2014) TMRNA-MEDIATED TRANS-TRANSLATION AS THE MAJOR RIBOSOME RESCUE SYSTEM IN A BACTERIAL CELL.FRONTIERS IN GENETICS. VOL. 5. ISSUE . P. - 117 80% 10
2 HIMENO, H , NAMEKI, N , KURITA, D , MUTO, A , ABO, T , (2015) RIBOSOME RESCUE SYSTEMS IN BACTERIA.BIOCHIMIE. VOL. 114. ISSUE . P. 102 -112 109 75% 10
3 HIMENO, H , KURITA, D , MUTO, A , (2014) MECHANISM OF TRANS-TRANSLATION REVEALED BY IN VITRO STUDIES.FRONTIERS IN MICROBIOLOGY. VOL. 5. ISSUE . P. - 92 87% 0
4 MOORE, SD , SAUER, RT , (2007) THE TMRNA SYSTEM FOR TRANSLATIONAL SURVEILLANCE AND RIBOSOME RESCUE.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 76. ISSUE . P. 101 -124 92 70% 165
5 KEILER, KC , (2015) MECHANISMS OF RIBOSOME RESCUE IN BACTERIA.NATURE REVIEWS MICROBIOLOGY. VOL. 13. ISSUE 5. P. 285 -297 80 62% 21
6 JANSSEN, BD , HAYES, CS , (2012) THE TMRNA RIBOSOME-RESCUE SYSTEM.ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY, VOL 86. VOL. 86. ISSUE . P. 151 -191 109 55% 26
7 KEILER, KC , (2008) BIOLOGY OF TRANS-TRANSLATION.ANNUAL REVIEW OF MICROBIOLOGY. VOL. 62. ISSUE . P. 133 -151 79 73% 102
8 SIMMS, CL , THOMAS, EN , ZAHER, HS , (2017) RIBOSOME-BASED QUALITY CONTROL OF MRNA AND NASCENT PEPTIDES.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 8. ISSUE 1. P. - 68 49% 1
9 KEILER, KC , FEAGA, HA , (2014) RESOLVING NONSTOP TRANSLATION COMPLEXES IS A MATTER OF LIFE OR DEATH.JOURNAL OF BACTERIOLOGY. VOL. 196. ISSUE 12. P. 2123 -2130 64 74% 7
10 DULEBOHN, D , CHOY, J , SUNDERMEIER, T , OKAN, N , KARZAI, AW , (2007) TRANS-TRANSLATION: THE TMRNA-MEDIATED SURVEILLANCE MECHANISM FOR RIBOSOME RESCUE, DIRECTED PROTEIN DEGRADATION, AND NONSTOP MRNA DECAY.BIOCHEMISTRY. VOL. 46. ISSUE 16. P. 4681 -4693 72 75% 44

Classes with closest relation at Level 1


Rank Class id link
1 6806 TRANSLATION TERMINATION//RELEASE FACTOR//FRAMESHIFT
2 6760 RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME
3 17891 RRP6//MRNP BIOGENESIS METAB//DIS3
4 5584 ATP DEPENDENT PROTEASE//CLPB//FTSH
5 360 RIBOSOME//PEPTIDYL TRANSFERASE//AG RIBOSOMEN
6 9543 SHINE DALGARNO SEQUENCE//LEADERLESS MRNA//TRANSLATION INITIATION
7 10566 TOXIN ANTITOXIN SYSTEM//TOXIN ANTITOXIN//POST SEGREGATIONAL KILLING
8 10335 NMD//UPF1//NONSENSE MEDIATED MRNA DECAY
9 7121 HFQ//SRNA//RYHB
10 27965 PRH//GROUCHO//PROLINE RICH HOMEODOMAIN PRH

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