Class information for:
Level 1: ATP DEPENDENT PROTEASE//CLPB//FTSH

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5584 1601 47.8 88%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
1297 2             RIBOSOME//TRANSLATION TERMINATION//TMRNA 8599
5584 1                   ATP DEPENDENT PROTEASE//CLPB//FTSH 1601

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ATP DEPENDENT PROTEASE authKW 1043614 4% 79% 69
2 CLPB authKW 711578 3% 75% 50
3 FTSH authKW 611399 3% 70% 46
4 LON PROTEASE authKW 611213 3% 64% 50
5 LON authKW 382953 2% 57% 35
6 ATP DEPENDENT PROTEOLYSIS authKW 325014 2% 61% 28
7 CLP PROTEASE authKW 322281 2% 65% 26
8 ATP DEPENDENT PROTEASES authKW 305128 1% 80% 20
9 CLPA authKW 268184 1% 94% 15
10 HSP104 authKW 256308 2% 40% 34

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 10631 66% 0% 1057
2 Cell Biology 3711 26% 0% 411
3 Microbiology 3270 20% 0% 317
4 Biophysics 2019 14% 0% 219
5 Plant Sciences 493 9% 0% 147
6 Genetics & Heredity 91 5% 0% 74
7 Biochemical Research Methods 58 3% 0% 48
8 Biology 13 2% 0% 25
9 Crystallography 12 1% 0% 23
10 Biotechnology & Applied Microbiology 9 3% 0% 42

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AVIRU 76284 0% 100% 4
2 EXIST TRANSFER 57213 0% 100% 3
3 MOL MIKROBIOL 38142 0% 100% 2
4 UNITE BIOCHIM MICROBIENNE 36596 1% 16% 12
5 ZENTRUM MOL BIOL HEIDELBERG 27110 0% 18% 8
6 BIOCHEM MOL BIOL IBMB 25427 0% 67% 2
7 NRL PROT BIOCHEM 21451 0% 38% 3
8 BIOELE OCHEM NANOTECHNOL GRP 19071 0% 100% 1
9 BIOL 68523 19071 0% 100% 1
10 BIOL CHEMCLUSTER EXCELLENCE MACROMOL COMPLEX 19071 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF STRUCTURAL BIOLOGY 11593 3% 1% 46
2 JOURNAL OF BACTERIOLOGY 6963 7% 0% 111
3 MOLECULAR MICROBIOLOGY 5893 4% 1% 61
4 JOURNAL OF BIOLOGICAL CHEMISTRY 3495 11% 0% 171
5 MOLECULAR CELL 2894 2% 1% 29
6 NATURE STRUCTURAL & MOLECULAR BIOLOGY 2520 1% 1% 17
7 JOURNAL OF MOLECULAR BIOLOGY 1735 3% 0% 47
8 STRUCTURE 1423 1% 0% 17
9 RESEARCH IN MICROBIOLOGY 1394 1% 1% 14
10 PLANT CELL 1375 1% 0% 21

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ATP DEPENDENT PROTEASE 1043614 4% 79% 69 Search ATP+DEPENDENT+PROTEASE Search ATP+DEPENDENT+PROTEASE
2 CLPB 711578 3% 75% 50 Search CLPB Search CLPB
3 FTSH 611399 3% 70% 46 Search FTSH Search FTSH
4 LON PROTEASE 611213 3% 64% 50 Search LON+PROTEASE Search LON+PROTEASE
5 LON 382953 2% 57% 35 Search LON Search LON
6 ATP DEPENDENT PROTEOLYSIS 325014 2% 61% 28 Search ATP+DEPENDENT+PROTEOLYSIS Search ATP+DEPENDENT+PROTEOLYSIS
7 CLP PROTEASE 322281 2% 65% 26 Search CLP+PROTEASE Search CLP+PROTEASE
8 ATP DEPENDENT PROTEASES 305128 1% 80% 20 Search ATP+DEPENDENT+PROTEASES Search ATP+DEPENDENT+PROTEASES
9 CLPA 268184 1% 94% 15 Search CLPA Search CLPA
10 HSP104 256308 2% 40% 34 Search HSP104 Search HSP104

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 SAUER, RT , BAKER, TA , (2011) AAA+ PROTEASES: ATP-FUELED MACHINES OF PROTEIN DESTRUCTION.ANNUAL REVIEW OF BIOCHEMISTRY, VOL 80. VOL. 80. ISSUE . P. 587-612 113 71% 206
2 BAKER, TA , SAUER, RT , (2012) CLPXP, AN ATP-POWERED UNFOLDING AND PROTEIN-DEGRADATION MACHINE.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1823. ISSUE 1. P. 15-28 90 83% 93
3 OLIVARES, AO , BAKER, TA , SAUER, RT , (2016) MECHANISTIC INSIGHTS INTO BACTERIAL AAA PLUS PROTEASES AND PROTEIN-REMODELLING MACHINES.NATURE REVIEWS MICROBIOLOGY. VOL. 14. ISSUE 1. P. 33 -44 74 69% 12
4 BITTNER, LM , ARENDS, J , NARBERHAUS, F , (2016) ATP-DEPENDENT PROTEASES IN BACTERIA.BIOPOLYMERS. VOL. 105. ISSUE 8. P. 505 -517 107 78% 0
5 HODSON, S , MARSHALL, JJT , BURSTON, SG , (2012) MAPPING THE ROAD TO RECOVERY: THE CLPB/HSP104 MOLECULAR CHAPERONE.JOURNAL OF STRUCTURAL BIOLOGY. VOL. 179. ISSUE 2. P. 161-171 79 87% 16
6 VENKATESH, S , LEE, J , SINGH, K , LEE, I , SUZUKI, CK , (2012) MULTITASKING IN THE MITOCHONDRION BY THE ATP-DEPENDENT LON PROTEASE.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1823. ISSUE 1. P. 56-66 84 65% 58
7 DESANTIS, ME , SHORTER, J , (2012) THE ELUSIVE MIDDLE DOMAIN OF HSP104 AND CLPB: LOCATION AND FUNCTION.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1823. ISSUE 1. P. 29-39 89 68% 24
8 DOYLE, SM , WICKNER, S , (2009) HSP104 AND CLPB: PROTEIN DISAGGREGATING MACHINES.TRENDS IN BIOCHEMICAL SCIENCES. VOL. 34. ISSUE 1. P. 40 -48 64 80% 128
9 ITO, K , AKIYAMA, Y , (2005) CELLULAR FUNCTIONS, MECHANISM OF ACTION, AND REGULATION OF FTSH PROTEASE.ANNUAL REVIEW OF MICROBIOLOGY. VOL. 59. ISSUE . P. 211 -231 74 76% 206
10 LEE, I , SUZUKI, CK , (2008) FUNCTIONAL MECHANICS OF THE ATP-DEPENDENT LON PROTEASE-LESSONS FROM ENDOGENOUS PROTEIN AND SYNTHETIC PEPTIDE SUBSTRATES.BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. VOL. 1784. ISSUE 5. P. 727-735 75 82% 44

Classes with closest relation at Level 1


Rank Class id link
1 16075 HRCA//CIRCE//SIGMA32
2 11831 SUP35//YEAST PRION//URE2P
3 15103 HTRA1//HTRA//HTRA2
4 18779 TMRNA//TRANS TRANSLATION//SMPB
5 31973 PUPYLATION//PROKARYOTIC UBIQUITIN LIKE PROTEIN//PAFA
6 22758 ARGINYLATION//JOHANSON BLIZZARD SYNDROME//N END RULE
7 6152 DNAJ//DNAK//GRPE
8 24380 BACTERIOPHAGE LAMBDA DEVELOPMENT//LAMBDA PLASMIDS//COLIPHAGE LAMBDA
9 1429 PROTEASOME//MULTICATALYTIC PROTEINASE//IMMUNOPROTEASOME
10 11129 D1 PROTEIN//PHOTOINHIBITION//PHOTOSYSTEM II

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