Class information for:
Level 1: DATABASE LIFE SCI//DDBJ//EMTRAIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
18864 533 26.5 71%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
126 2             MOLECULAR BIOLOGY AND EVOLUTION//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 23963
18864 1                   DATABASE LIFE SCI//DDBJ//EMTRAIN 533

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DATABASE LIFE SCI address 144398 2% 23% 11
2 DDBJ address 141007 2% 31% 8
3 EMTRAIN address 114577 0% 100% 2
4 MIABI authKW 114577 0% 100% 2
5 MOUSE GENOM INFORMAT GRP address 114577 0% 100% 2
6 PHARMATRAIN address 114577 0% 100% 2
7 RD SCI RELAT address 114577 0% 100% 2
8 RESOURCEOME authKW 114577 0% 100% 2
9 VECTORBASE address 114577 0% 100% 2
10 DNA DATA BANK J AN address 103447 3% 11% 17

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Mathematical & Computational Biology 23952 39% 0% 207
2 Biochemical Research Methods 5182 33% 0% 176
3 Biotechnology & Applied Microbiology 3162 33% 0% 176
4 Biochemistry & Molecular Biology 813 35% 0% 184
5 Genetics & Heredity 131 8% 0% 42
6 Computer Science, Theory & Methods 104 5% 0% 24
7 Computer Science, Information Systems 53 3% 0% 17
8 Computer Science, Interdisciplinary Applications 47 3% 0% 17
9 Medical Informatics 34 1% 0% 6
10 Computer Science, Software Engineering 31 2% 0% 12

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DATABASE LIFE SCI 144398 2% 23% 11
2 DDBJ 141007 2% 31% 8
3 EMTRAIN 114577 0% 100% 2
4 MOUSE GENOM INFORMAT GRP 114577 0% 100% 2
5 PHARMATRAIN 114577 0% 100% 2
6 RD SCI RELAT 114577 0% 100% 2
7 VECTORBASE 114577 0% 100% 2
8 DNA DATA BANK J AN 103447 3% 11% 17
9 ENGN ESAT SCD 76383 0% 67% 2
10 BIOSCI DATABASE 70503 1% 31% 4

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 54952 5% 4% 25
2 JOURNAL OF BIOMEDICAL SEMANTICS 34066 2% 5% 12
3 NUCLEIC ACIDS RESEARCH 30253 27% 0% 144
4 BIOINFORMATICS 28670 14% 1% 73
5 BMC BIOINFORMATICS 27468 11% 1% 60
6 BRIEFINGS IN BIOINFORMATICS 23789 3% 2% 17
7 LECTURE NOTES IN BIOINFORMATICS 2934 0% 3% 2
8 BIOTECHFORUM ( BTF ) 1073 1% 0% 7
9 MYCOKEYS 922 0% 2% 1
10 GENOME MEDICINE 782 1% 0% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MIABI 114577 0% 100% 2 Search MIABI Search MIABI
2 RESOURCEOME 114577 0% 100% 2 Search RESOURCEOME Search RESOURCEOME
3 GENOME BROWSER 82486 1% 24% 6 Search GENOME+BROWSER Search GENOME+BROWSER
4 BIOHACKATHON 76383 0% 67% 2 Search BIOHACKATHON Search BIOHACKATHON
5 BIOMOBY 76383 0% 67% 2 Search BIOMOBY Search BIOMOBY
6 SADI 73653 1% 43% 3 Search SADI Search SADI
7 3 3 CHOLAMIDOPROPYLDIMETHYLAMMONIO 1 PROPANE SULFONATE CHAPS 57288 0% 100% 1 Search 3+3+CHOLAMIDOPROPYLDIMETHYLAMMONIO+1+PROPANE+SULFONATE+CHAPS Search 3+3+CHOLAMIDOPROPYLDIMETHYLAMMONIO+1+PROPANE+SULFONATE+CHAPS
8 3D EM DAS 57288 0% 100% 1 Search 3D+EM+DAS Search 3D+EM+DAS
9 ADAPTIVE CONFLICT 57288 0% 100% 1 Search ADAPTIVE+CONFLICT Search ADAPTIVE+CONFLICT
10 ANALYSIS ARTEFACT 57288 0% 100% 1 Search ANALYSIS+ARTEFACT Search ANALYSIS+ARTEFACT

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BENSON, DA , CLARK, K , KARSCH-MIZRACHI, I , LIPMAN, DJ , OSTELL, J , SAYERS, EW , (2015) GENBANK.NUCLEIC ACIDS RESEARCH. VOL. 43. ISSUE D1. P. D30 -D35 10 71% 94
2 CLARK, K , KARSCH-MIZRACHI, I , LIPMAN, DJ , OSTELL, J , SAYERS, EW , (2016) GENBANK.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE D1. P. D67 -D72 9 69% 12
3 BENSON, DA , CAVANAUGH, M , CLARK, K , KARSCH-MIZRACHI, I , LIPMAN, DJ , OSTELL, J , SAYERS, EW , (2013) GENBANK.NUCLEIC ACIDS RESEARCH. VOL. 41. ISSUE D1. P. D36-D42 6 60% 532
4 MASHIMA, J , KODAMA, Y , KOSUGE, T , FUJISAWA, T , KATAYAMA, T , NAGASAKI, H , OKUDA, Y , KAMINUMA, E , OGASAWARA, O , OKUBO, K , ET AL (2016) DNA DATA BANK OF JAPAN (DDBJ) PROGRESS REPORT.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE D1. P. D51 -D57 14 58% 2
5 KODAMA, Y , MASHIMA, J , KOSUGE, T , KATAYAMA, T , FUJISAWA, T , KAMINUMA, E , OGASAWARA, O , OKUBO, K , TAKAGI, T , NAKAMURA, Y , (2015) THE DDBJ JAPANESE GENOTYPE-PHENOTYPE ARCHIVE FOR GENETIC AND PHENOTYPIC HUMAN DATA.NUCLEIC ACIDS RESEARCH. VOL. 43. ISSUE D1. P. D18 -D22 16 52% 5
6 KOSUGE, T , MASHIMA, J , KODAMA, Y , FUJISAWA, T , KAMINUMA, E , OGASAWARA, O , OKUBO, K , TAKAGI, T , NAKAMURA, Y , (2014) DDBJ PROGRESS REPORT: A NEW SUBMISSION SYSTEM FOR LEADING TO A CORRECT ANNOTATION.NUCLEIC ACIDS RESEARCH. VOL. 42. ISSUE D1. P. D44-D49 13 59% 16
7 MORENO, BG , PEYPOCH, XM , (2011) GENEXP: AN INTERACTIVE WEB-BASED GENOMIC DAS CLIENT WITH CLIENT-SIDE DATA RENDERING.PLOS ONE. VOL. 6. ISSUE 7. P. - 11 85% 1
8 BHAGAT, J , TANOH, F , NZUOBONTANE, E , LAURENT, T , ORLOWSKI, J , ROOS, M , WOLSTENCROFT, K , ALEKSEJEVS, S , STEVENS, R , PETTIFER, S , ET AL (2010) BIOCATALOGUE: A UNIVERSAL CATALOGUE OF WEB SERVICES FOR THE LIFE SCIENCES.NUCLEIC ACIDS RESEARCH. VOL. 38. ISSUE . P. W689 -W694 11 69% 63
9 BENSON, DA , CLARK, K , KARSCH-MIZRACHI, I , LIPMAN, DJ , OSTELL, J , SAYERS, EW , (2014) GENBANK.NUCLEIC ACIDS RESEARCH. VOL. 42. ISSUE D1. P. D32-D37 7 64% 120
10 MCWILLIAM, H , LI, WZ , ULUDAG, M , SQUIZZATO, S , PARK, YM , BUSO, N , COWLEY, AP , LOPEZ, R , (2013) ANALYSIS TOOL WEB SERVICES FROM THE EMBL-EBI.NUCLEIC ACIDS RESEARCH. VOL. 41. ISSUE W1. P. W597-W600 9 36% 350

Classes with closest relation at Level 1


Rank Class id link
1 36483 GENOMIC DATA VISUALIZATION//ALTERNATE ASSEMBLIES OF COW GENOMES//BAC FISH MAPPING
2 9683 EMBL OUTSTN//LECTURE NOTES IN BIOINFORMATICS//PROT INFORMAT OURCE
3 20039 ORTHOLOGY//BIDIRECTIONAL BEST HIT//GENOME FUNCTIONAL PREDICTION
4 31716 LIMS//BREEDING GENET OURCES//ATTRIBUTE MATCHING ALGORITHM
5 19900 GENE INDEXED MUTANT//NAA PLANT SOIL NUTR UNIT//ORYZABASE
6 22669 BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION//BIOINFORMATICS EDUCATION//BIOINFORMATICS COURSES
7 2013 GENOME ASSEMBLY//BIOINFORMATICS//VARIANT CALLING
8 11342 GENE PREDICTION//GENE FINDING//GENE RECOGNITION
9 10975 GENE PRIORITIZATION//DISEASE GENE PREDICTION//HUMAN DISEASE NETWORK
10 26160 SCIENCE GATEWAY//JOURNAL OF GRID COMPUTING//APPLICATION KERNELS

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