Class information for:
Level 1: CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3065 2075 52.1 85%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
3084 2             CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION 2372
3065 1                   CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION 2075

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHROMOSOME TERRITORY authKW 1177534 5% 78% 102
2 NUCLEAR ARCHITECTURE authKW 585701 4% 44% 91
3 NUCLEAR ORGANIZATION authKW 398509 4% 32% 86
4 CHROMOSOME CONFORMATION CAPTURE authKW 305475 2% 59% 35
5 HI C authKW 242584 1% 63% 26
6 3D FISH authKW 238364 1% 90% 18
7 NUCL DYNAM PROGRAMME address 189694 1% 68% 19
8 TRANSCRIPTION FACTORY authKW 162203 1% 53% 21
9 INTERPHASE CHROMOSOMES authKW 150475 1% 68% 15
10 GENE POSITIONING authKW 146269 1% 76% 13

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 18153 48% 0% 989
2 Genetics & Heredity 13783 34% 0% 710
3 Biochemistry & Molecular Biology 3248 35% 0% 724
4 Biochemical Research Methods 914 8% 0% 163
5 Biotechnology & Applied Microbiology 846 10% 0% 205
6 Mathematical & Computational Biology 825 4% 0% 82
7 Developmental Biology 560 4% 0% 76
8 Microscopy 193 1% 0% 24
9 Biophysics 168 4% 0% 91
10 Biology 87 3% 0% 53

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NUCL DYNAM PROGRAMME 189694 1% 68% 19
2 PROGRAM SYST BIOL 108079 1% 28% 26
3 NUCL GENOM HLTH 74482 0% 56% 9
4 GENOME FUNCT GRP 72095 0% 70% 7
5 CHROMATIN GENE EXP S 66192 1% 30% 15
6 GRP REGULAT SPATIALE GENOMES 65539 0% 64% 7
7 HOWARD HUGHES MED PROGRAM SYST BIOL 58856 0% 100% 4
8 RG DEV DIS 58856 0% 100% 4
9 CHAIR ANTHROPOL HUMAN GENET 52966 0% 60% 6
10 GENOME ARCHITECTURE 52547 0% 71% 5

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NUCLEUS 46295 1% 11% 29
2 CHROMOSOME RESEARCH 37713 3% 4% 65
3 CHROMOSOMA 31005 4% 3% 75
4 CURRENT OPINION IN GENETICS & DEVELOPMENT 18748 2% 3% 50
5 NUCLEUS-AUSTIN 17453 1% 8% 14
6 CURRENT OPINION IN CELL BIOLOGY 11771 2% 2% 46
7 GENOME BIOLOGY 11293 2% 2% 48
8 JOURNAL OF CELL SCIENCE 6763 4% 1% 78
9 EPIGENETICS & CHROMATIN 6139 1% 4% 11
10 GENOME RESEARCH 6121 1% 2% 24

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CHROMOSOME TERRITORY 1177534 5% 78% 102 Search CHROMOSOME+TERRITORY Search CHROMOSOME+TERRITORY
2 NUCLEAR ARCHITECTURE 585701 4% 44% 91 Search NUCLEAR+ARCHITECTURE Search NUCLEAR+ARCHITECTURE
3 NUCLEAR ORGANIZATION 398509 4% 32% 86 Search NUCLEAR+ORGANIZATION Search NUCLEAR+ORGANIZATION
4 CHROMOSOME CONFORMATION CAPTURE 305475 2% 59% 35 Search CHROMOSOME+CONFORMATION+CAPTURE Search CHROMOSOME+CONFORMATION+CAPTURE
5 HI C 242584 1% 63% 26 Search HI+C Search HI+C
6 3D FISH 238364 1% 90% 18 Search 3D+FISH Search 3D+FISH
7 TRANSCRIPTION FACTORY 162203 1% 53% 21 Search TRANSCRIPTION+FACTORY Search TRANSCRIPTION+FACTORY
8 INTERPHASE CHROMOSOMES 150475 1% 68% 15 Search INTERPHASE+CHROMOSOMES Search INTERPHASE+CHROMOSOMES
9 GENE POSITIONING 146269 1% 76% 13 Search GENE+POSITIONING Search GENE+POSITIONING
10 CHIA PET 119182 0% 90% 9 Search CHIA+PET Search CHIA+PET

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 DENKER, A , DE LAAT, W , (2016) THE SECOND DECADE OF 3C TECHNOLOGIES: DETAILED INSIGHTS INTO NUCLEAR ORGANIZATION.GENES & DEVELOPMENT. VOL. 30. ISSUE 12. P. 1357 -1382 133 67% 8
2 CREMER, T , CREMER, M , (2010) CHROMOSOME TERRITORIES.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 2. ISSUE 3. P. - 106 80% 288
3 FRASER, J , WILLIAMSON, I , BICKMORE, WA , DOSTIE, J , (2015) AN OVERVIEW OF GENOME ORGANIZATION AND HOW WE GOT THERE: FROM FISH TO HI-C.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 79. ISSUE 3. P. 347 -372 161 55% 17
4 DEKKER, J , MARTI-RENOM, MA , MIRNY, LA , (2013) EXPLORING THE THREE-DIMENSIONAL ORGANIZATION OF GENOMES: INTERPRETING CHROMATIN INTERACTION DATA.NATURE REVIEWS GENETICS. VOL. 14. ISSUE 6. P. 390 -403 72 69% 246
5 SCHMITT, AD , HU, M , REN, B , (2016) GENOME-WIDE MAPPING AND ANALYSIS OF CHROMOSOME ARCHITECTURE.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 17. ISSUE 12. P. 743 -755 92 83% 3
6 SOLOVEI, I , THANISCH, K , FEODOROVA, Y , (2016) HOW TO RULE THE NUCLEUS: DIVIDE ET IMPERA.CURRENT OPINION IN CELL BIOLOGY. VOL. 40. ISSUE . P. 47 -59 84 78% 4
7 DEKKER, J , MIRNY, L , (2016) THE 3D GENOME AS MODERATOR OF CHROMOSOMAL COMMUNICATION.CELL. VOL. 164. ISSUE 6. P. 1110 -1121 61 57% 28
8 ROUQUETTE, J , CREMER, C , CREMER, T , FAKAN, S , (2010) FUNCTIONAL NUCLEAR ARCHITECTURE STUDIED BY MICROSCOPY: PRESENT AND FUTURE.INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY, VOL 282. VOL. 282. ISSUE . P. 1-90 191 45% 33
9 AY, F , NOBLE, WS , (2015) ANALYSIS METHODS FOR STUDYING THE 3D ARCHITECTURE OF THE GENOME.GENOME BIOLOGY. VOL. 16. ISSUE . P. - 88 80% 10
10 PUESCHEL, R , CORAGGIO, F , MEISTER, P , (2016) FROM SINGLE GENES TO ENTIRE GENOMES: THE SEARCH FOR A FUNCTION OF NUCLEAR ORGANIZATION.DEVELOPMENT. VOL. 143. ISSUE 6. P. 910 -923 94 78% 1

Classes with closest relation at Level 1


Rank Class id link
1 11594 CTCF//CONTROL GENET PROC//SUHW
2 4702 CHIP SEQ//ENHANCER//PEAK CALLING
3 36383 HUMAN MOL GENET PROGRAM//CFTR GENE EXPRESSION//CFTR PROMOTER
4 3718 NUCLEOLUS//CAJAL BODIES//COILED BODIES
5 22145 NUCLEAR ACTIN//ACTIN RELATED PROTEIN//NUCLEAR MYOSIN I
6 22783 BIDIRECTIONAL PROMOTER//OPERON PREDICTION//INTERGENIC DISTANCE
7 27340 GENOME THEORY//GENOME CHAOS//GENOM CANC DIAG
8 12501 SIR COMPLEX//SIR PROTEINS//SIR3
9 1053 LAMIN//LAMINOPATHY//NUCLEAR ENVELOPE
10 12661 PRINS//INTERPHASE CYTOGENETICS//FAST FISH

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