Class information for:
Level 1: GENOME REARRANGEMENT//GENOME REARRANGEMENTS//SORTING BY REVERSALS

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
226 3       GENETICS & HEREDITY//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 49202
341 2             MOLECULAR BIOLOGY AND EVOLUTION//EVOLUTIONARY BIOLOGY//GENETICS & HEREDITY 18153
14964 1                   GENOME REARRANGEMENT//GENOME REARRANGEMENTS//SORTING BY REVERSALS 766

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 GENOME REARRANGEMENT authKW 1758851 11% 50% 85
2 GENOME REARRANGEMENTS authKW 829442 7% 40% 50
3 SORTING BY REVERSALS authKW 789941 3% 80% 24
4 BREAKPOINT GRAPH authKW 537603 2% 93% 14
5 COMMON INTERVALS authKW 537603 2% 93% 14
6 DCJ authKW 493719 2% 100% 12
7 SORTING BY TRANSPOSITIONS authKW 370289 1% 100% 9
8 GENE TEAMS authKW 329146 1% 100% 8
9 PREFIX REVERSALS authKW 329146 1% 100% 8
10 BREAKPOINT DISTANCE authKW 302961 1% 82% 9

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 34803 39% 0% 301
2 Biochemical Research Methods 10485 39% 0% 298
3 Biotechnology & Applied Microbiology 5249 35% 0% 271
4 Statistics & Probability 4539 19% 0% 146
5 Computer Science, Theory & Methods 4176 21% 0% 158
6 Computer Science, Interdisciplinary Applications 4088 20% 0% 154
7 Computer Science, Information Systems 831 9% 0% 70
8 Genetics & Heredity 814 15% 0% 112
9 Mathematics, Applied 727 13% 0% 102
10 Mathematics, Interdisciplinary Applications 358 5% 0% 41

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 DATA MIN SEARCH GRP 171429 1% 83% 5
2 EPFL IC LCBB 123430 0% 100% 3
3 AG GENOMINFORMAT 102843 1% 25% 10
4 LACIM 85420 2% 12% 18
5 EQUIPE EBM 82287 0% 100% 2
6 IIS LCBB 82287 0% 100% 2
7 PUBL HLTH INFORMAT FELLOW PROGRAM 82287 0% 100% 2
8 TEAM BAMBOO 82287 0% 100% 2
9 BIOINFORMAT GENOM FONCT BORDEAUX 74055 0% 60% 3
10 TECH FAK 64313 4% 6% 27

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF COMPUTATIONAL BIOLOGY 239370 13% 6% 97
2 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 48544 5% 3% 38
3 BMC BIOINFORMATICS 19476 8% 1% 61
4 ALGORITHMS FOR MOLECULAR BIOLOGY 19402 2% 4% 12
5 BIOINFORMATICS 11029 7% 0% 55
6 THEORETICAL COMPUTER SCIENCE 8657 6% 0% 48
7 LECTURE NOTES IN COMPUTER SCIENCE 6137 15% 0% 116
8 GENE-COMBIS 3427 0% 8% 1
9 SIAM JOURNAL ON DISCRETE MATHEMATICS 3270 2% 1% 13
10 JOURNAL OF COMBINATORIAL OPTIMIZATION 3041 1% 1% 10

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 GENOME REARRANGEMENT 1758851 11% 50% 85 Search GENOME+REARRANGEMENT Search GENOME+REARRANGEMENT
2 GENOME REARRANGEMENTS 829442 7% 40% 50 Search GENOME+REARRANGEMENTS Search GENOME+REARRANGEMENTS
3 SORTING BY REVERSALS 789941 3% 80% 24 Search SORTING+BY+REVERSALS Search SORTING+BY+REVERSALS
4 BREAKPOINT GRAPH 537603 2% 93% 14 Search BREAKPOINT+GRAPH Search BREAKPOINT+GRAPH
5 COMMON INTERVALS 537603 2% 93% 14 Search COMMON+INTERVALS Search COMMON+INTERVALS
6 DCJ 493719 2% 100% 12 Search DCJ Search DCJ
7 SORTING BY TRANSPOSITIONS 370289 1% 100% 9 Search SORTING+BY+TRANSPOSITIONS Search SORTING+BY+TRANSPOSITIONS
8 GENE TEAMS 329146 1% 100% 8 Search GENE+TEAMS Search GENE+TEAMS
9 PREFIX REVERSALS 329146 1% 100% 8 Search PREFIX+REVERSALS Search PREFIX+REVERSALS
10 BREAKPOINT DISTANCE 302961 1% 82% 9 Search BREAKPOINT+DISTANCE Search BREAKPOINT+DISTANCE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 37004 OPERON PREDICTION//CONSERVED GENE PAIR//OPERON
2 35820 CLOSEST STRING PROBLEM//CLOSEST SUBSTRING//CLOSEST STRING
3 19572 ORTHOLOGY//TREE RECONCILIATION//GENE TREE PARSIMONY
4 8481 WHOLE GENOME DUPLICATION//GENE DUPLICATION//GENOME DUPLICATION
5 22614 SEGMENTAL DUPLICATION//DUF1220//NBPF
6 34166 CIRCOS//GENOMIC DATA VISUALIZATION//BHF GLASGOW CARIOVASC
7 26129 BIDIRECTIONAL PROMOTER//NEIGHBORING GENES//452 BP PROMOTER
8 20321 CONSERVED NON CODING ELEMENTS//ENERGY ENVIRONM BIOL COMP//SARS MARINE MOL BIOL
9 6019 LATERAL GENE TRANSFER//HORIZONTAL GENE TRANSFER//TREE OF LIFE
10 10128 PLATYRRHINI//PLATYRRHINES//NEW WORLD MONKEYS

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