Class information for:
Level 2: MOLECULAR BIOLOGY AND EVOLUTION//EVOLUTIONARY BIOLOGY//GENETICS & HEREDITY

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
226 3       GENETICS & HEREDITY//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 49202
341 2             MOLECULAR BIOLOGY AND EVOLUTION//EVOLUTIONARY BIOLOGY//GENETICS & HEREDITY 18153
2929 1                   SELECTIVE SWEEP//MCDONALD KREITMAN TEST//GENETICS 2141
4078 1                   CODON MODELS//SYSTEMATIC BIOLOGY//MOLECULAR BIOLOGY AND EVOLUTION 1885
4230 1                   CODON USAGE//CODON USAGE BIAS//SYNONYMOUS CODON USAGE 1856
6019 1                   LATERAL GENE TRANSFER//HORIZONTAL GENE TRANSFER//TREE OF LIFE 1573
7823 1                   PHYLOGENETIC NETWORK//TIGHT SPAN//SUPERTREE 1348
8481 1                   WHOLE GENOME DUPLICATION//GENE DUPLICATION//GENOME DUPLICATION 1280
13775 1                   SPECIES TREE//GENE TREE//MULTISPECIES COALESCENT 844
14964 1                   GENOME REARRANGEMENT//GENOME REARRANGEMENTS//SORTING BY REVERSALS 766
15030 1                   ISOCHORES//EVOLUZ MOL//MALE MUTATION BIAS 762
16095 1                   SEX BIASED GENE EXPRESSION//INTRALOCUS SEXUAL CONFLICT//SEXUAL ANTAGONISM 700
18117 1                   MOLECULAR CLOCK//PHYLODYNAMICS//RELAXED CLOCK 592
18135 1                   INTRON GAIN//INTRON LOSS//INTRON EVOLUTION 591
19519 1                   ESSENTIAL GENES//TN SEQ//MINIMAL GENOME 526
19572 1                   ORTHOLOGY//TREE RECONCILIATION//GENE TREE PARSIMONY 523
20321 1                   CONSERVED NON CODING ELEMENTS//ENERGY ENVIRONM BIOL COMP//SARS MARINE MOL BIOL 488
22614 1                   SEGMENTAL DUPLICATION//DUF1220//NBPF 397
22669 1                   CLOSED LOOPS//EVOLUTIONARY BIOINFORMAT//GENOME ERS 395
23442 1                   CHARGAFFS SECOND PARITY RULE//SKEWS//STRAND ASYMMETRY 369
26129 1                   BIDIRECTIONAL PROMOTER//NEIGHBORING GENES//452 BP PROMOTER 284
26588 1                   GENE COMPACTNESS//SELECTIVE CONSTRAINT//EVOLUTIONARY RATE 271
29383 1                   PROCESSED PSEUDOGENES//DUPLICATED PSEUDOGENES//PSEUDOGENES 205
31374 1                   RECH AVANCEE GENOM ENVIRONM//4 2 4 METHOD//ACCELERATION OF AMINO ACID SUBSTITUTIONS 167
36260 1                   ANCESTRAL RESIDUE//COMMONOTE//PROTEIN RESURRECTION 101
37004 1                   OPERON PREDICTION//CONSERVED GENE PAIR//OPERON 89

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MOLECULAR BIOLOGY AND EVOLUTION journal 586781 8% 24% 1396
2 EVOLUTIONARY BIOLOGY WoSSC 310383 27% 4% 4983
3 GENETICS & HEREDITY WoSSC 241006 48% 2% 8645
4 SYSTEMATIC BIOLOGY journal 231574 2% 31% 432
5 CODON USAGE authKW 197225 1% 42% 270
6 JOURNAL OF MOLECULAR EVOLUTION journal 179375 3% 16% 631
7 CODON USAGE BIAS authKW 170541 1% 72% 136
8 ISOCHORES authKW 156375 1% 67% 135
9 PHYLOGENETIC NETWORK authKW 152769 1% 69% 127
10 GENOME BIOLOGY AND EVOLUTION journal 124237 2% 22% 331

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Evolutionary Biology 310383 27% 4% 4983
2 Genetics & Heredity 241006 48% 2% 8645
3 Mathematical & Computational Biology 82242 13% 2% 2294
4 Biochemistry & Molecular Biology 27790 34% 0% 6245
5 Biotechnology & Applied Microbiology 25653 17% 1% 3081
6 Biochemical Research Methods 15747 11% 1% 1920
7 Biology 7681 6% 0% 1171
8 Ecology 2383 5% 0% 947
9 Statistics & Probability 2298 3% 0% 595
10 Computer Science, Interdisciplinary Applications 1358 3% 0% 545

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 EVOLUZ MOL 65429 0% 88% 43
2 BIOTECHNOL INFORMAT 41368 1% 10% 232
3 STUDY EVOLUT 40278 0% 36% 64
4 ORG EVOLUC GENOMA 39316 0% 65% 35
5 BIOINFORMAT 39085 3% 4% 583
6 ECOL EVOLUT 34060 2% 5% 423
7 EVOLUTIONARY BIOINFORMAT 33186 0% 64% 30
8 EVOLUTIONARY BIOL 29308 2% 5% 334
9 BIOL STAT COMPUTAT BIOL 26816 0% 19% 84
10 ALLAN WILSON MOL ECOL EVOLUT 25899 1% 15% 98

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MOLECULAR BIOLOGY AND EVOLUTION 586781 8% 24% 1396
2 SYSTEMATIC BIOLOGY 231574 2% 31% 432
3 JOURNAL OF MOLECULAR EVOLUTION 179375 3% 16% 631
4 GENOME BIOLOGY AND EVOLUTION 124237 2% 22% 331
5 GENETICS 75381 4% 6% 757
6 BMC EVOLUTIONARY BIOLOGY 66750 2% 11% 369
7 JOURNAL OF COMPUTATIONAL BIOLOGY 62956 1% 15% 243
8 GENOME RESEARCH 59828 2% 10% 342
9 BIOINFORMATICS 52733 3% 5% 589
10 EVOLUTIONARY BIOINFORMATICS 48281 1% 29% 97

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 CODON USAGE 197225 1% 42% 270 Search CODON+USAGE Search CODON+USAGE
2 CODON USAGE BIAS 170541 1% 72% 136 Search CODON+USAGE+BIAS Search CODON+USAGE+BIAS
3 ISOCHORES 156375 1% 67% 135 Search ISOCHORES Search ISOCHORES
4 PHYLOGENETIC NETWORK 152769 1% 69% 127 Search PHYLOGENETIC+NETWORK Search PHYLOGENETIC+NETWORK
5 CODON BIAS 101339 1% 50% 118 Search CODON+BIAS Search CODON+BIAS
6 GC CONTENT 91695 1% 40% 134 Search GC+CONTENT Search GC+CONTENT
7 SYNONYMOUS CODON USAGE 89367 0% 82% 63 Search SYNONYMOUS+CODON+USAGE Search SYNONYMOUS+CODON+USAGE
8 SPECIES TREE 87311 1% 41% 123 Search SPECIES+TREE Search SPECIES+TREE
9 GENE TREE 86270 1% 48% 103 Search GENE+TREE Search GENE+TREE
10 TRANSLATIONAL SELECTION 85455 0% 93% 53 Search TRANSLATIONAL+SELECTION Search TRANSLATIONAL+SELECTION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 747 BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY//BMC BIOINFORMATICS
2 2658 GRAPHICAL REPRESENTATION//SUCCESS RUNS//JOURNAL OF QUANTITATIVE LINGUISTICS
3 1473 SPOTTED WING DROSOPHILA//DROSOPHILA SUBOBSCURA//EVOLUTION
4 3475 ASPARAGUS OFFICINALIS//ASPARAGUS//ASPARAGUS OFFICINALIS L
5 1836 CHROMOSOME TERRITORY//CHIP SEQ//NUCLEAR ARCHITECTURE
6 756 MATHEMATICAL & COMPUTATIONAL BIOLOGY//BMC BIOINFORMATICS//BIOINFORMATICS
7 1698 EXPERIMENTAL EVOLUTION//EVOLUTIONARY COMPUTATION//RUNTIME ANALYSIS
8 2681 WOLBACHIA//CYTOPLASMIC INCOMPATIBILITY//ENDOSYMBIONT
9 2703 6 MERCAPTOPURINE//THIOPURINE METHYLTRANSFERASE//AZATHIOPRINE
10 1925 BIOLOGY & PHILOSOPHY//JOURNAL OF THE HISTORY OF BIOLOGY//HISTORY & PHILOSOPHY OF SCIENCE

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