Class information for:
Level 1: ESSENTIAL GENES//TN SEQ//MINIMAL GENOME

Basic class information

Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.



Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
226 3       GENETICS & HEREDITY//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 49202
341 2             MOLECULAR BIOLOGY AND EVOLUTION//EVOLUTIONARY BIOLOGY//GENETICS & HEREDITY 18153
19519 1                   ESSENTIAL GENES//TN SEQ//MINIMAL GENOME 526

Terms with highest relevance score



rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 ESSENTIAL GENES authKW 551107 8% 21% 43
2 TN SEQ authKW 285477 2% 53% 9
3 MINIMAL GENOME authKW 258913 2% 39% 11
4 SUBTRACTIVE GENOMICS authKW 215696 1% 60% 6
5 ALLELIC REPLACEMENT MUTAGENESIS authKW 119834 0% 100% 2
6 IN SILICO DRUG TARGETS authKW 119834 0% 100% 2
7 KAAS SERVER authKW 119834 0% 100% 2
8 NEW ANTIMICROBIAL AGENT authKW 119834 0% 100% 2
9 SECTOR AGR MICROBIOL AGRIFOOD TECHNOL address 119834 0% 100% 2
10 SECTOR FOOD TECHNOL address 119834 0% 100% 2

Web of Science journal categories



chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Microbiology 3385 34% 0% 178
2 Biotechnology & Applied Microbiology 1827 26% 0% 135
3 Genetics & Heredity 894 18% 0% 95
4 Biochemical Research Methods 520 11% 0% 59
5 Biochemistry & Molecular Biology 503 28% 0% 149
6 Mathematical & Computational Biology 454 6% 0% 30
7 Pharmacology & Pharmacy 75 10% 0% 50
8 Infectious Diseases 20 3% 0% 14
9 Cell Biology 20 5% 0% 28
10 Biology 16 2% 0% 12

Address terms



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 SECTOR AGR MICROBIOL AGRIFOOD TECHNOL 119834 0% 100% 2
2 SECTOR FOOD TECHNOL 119834 0% 100% 2
3 4MD 59917 0% 100% 1
4 ANTIBACT 59917 0% 100% 1
5 BIOPROTECT PORTFOLIO 59917 0% 100% 1
6 DIRECTORATE BIOTECHNOL AGR FOOD 59917 0% 100% 1
7 DIRECTORATE FOOD AGR BIOTECHNOL 59917 0% 100% 1
8 GENOME EXP S 59917 0% 100% 1
9 GESELL ANGEW BIOTECHNOL 59917 0% 100% 1
10 HEAD SECT SCI TECHNOL EDUC 59917 0% 100% 1

Journals



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CURRENT OPINION IN MICROBIOLOGY 10424 3% 1% 18
2 CURRENT OPINION IN BIOTECHNOLOGY 2001 2% 0% 9
3 MBIO 1845 2% 0% 8
4 TRENDS IN MICROBIOLOGY 1583 1% 0% 7
5 MICROBIAL CELL FACTORIES 1441 1% 0% 6
6 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 1346 1% 1% 3
7 BMC GENOMICS 1310 3% 0% 15
8 JOURNAL OF MICROBIOLOGICAL METHODS 1192 2% 0% 10
9 MOLECULAR BIOSYSTEMS 1019 1% 0% 7
10 COMPUTATIONAL BIOLOGY AND CHEMISTRY 995 1% 0% 4

Author Key Words



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 ESSENTIAL GENES 551107 8% 21% 43 Search ESSENTIAL+GENES Search ESSENTIAL+GENES
2 TN SEQ 285477 2% 53% 9 Search TN+SEQ Search TN+SEQ
3 MINIMAL GENOME 258913 2% 39% 11 Search MINIMAL+GENOME Search MINIMAL+GENOME
4 SUBTRACTIVE GENOMICS 215696 1% 60% 6 Search SUBTRACTIVE+GENOMICS Search SUBTRACTIVE+GENOMICS
5 ALLELIC REPLACEMENT MUTAGENESIS 119834 0% 100% 2 Search ALLELIC+REPLACEMENT+MUTAGENESIS Search ALLELIC+REPLACEMENT+MUTAGENESIS
6 IN SILICO DRUG TARGETS 119834 0% 100% 2 Search IN+SILICO+DRUG+TARGETS Search IN+SILICO+DRUG+TARGETS
7 KAAS SERVER 119834 0% 100% 2 Search KAAS+SERVER Search KAAS+SERVER
8 NEW ANTIMICROBIAL AGENT 119834 0% 100% 2 Search NEW+ANTIMICROBIAL+AGENT Search NEW+ANTIMICROBIAL+AGENT
9 TRANSPOSON SEQUENCING TN SEQ 119834 0% 100% 2 Search TRANSPOSON+SEQUENCING+TN+SEQ Search TRANSPOSON+SEQUENCING+TN+SEQ
10 REDUCED GENOME 106514 1% 44% 4 Search REDUCED+GENOME Search REDUCED+GENOME

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1



rank cluster_id2 link
1 37004 OPERON PREDICTION//CONSERVED GENE PAIR//OPERON
2 26588 GENE COMPACTNESS//SELECTIVE CONSTRAINT//EVOLUTIONARY RATE
3 13800 GENETIC INTERACTION//BANTING BEST MED//SYNTHETIC DOSAGE LETHALITY
4 18497 GENE SYNTHESIS//DUAL USE//BIOLOGICAL AND TOXIN WEAPONS CONVENTION
5 30752 PLATENSIMYCIN//PLATENCIN//STREPTOMYCES PLATENSIS
6 1373 FLUX BALANCE ANALYSIS//METABOLIC NETWORK//CONSTRAINT BASED MODELING
7 23442 CHARGAFFS SECOND PARITY RULE//SKEWS//STRAND ASYMMETRY
8 22291 OBG//RBFA//YJEQ PROTEIN
9 24220 PEPTIDE DEFORMYLASE//PEPTIDE DEFORMYLASE INHIBITORS//ACTINONIN
10 17377 YEAST//CHROMOSOME XIV//CHROMOSOME VII

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