Class information for:
Level 1: FLUX BALANCE ANALYSIS//METABOLIC NETWORK//CONSTRAINT BASED MODELING

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
393 3       METABOLOMICS//METABONOMICS//ATP SYNTHASE 32518
2138 2             FLUX BALANCE ANALYSIS//METABOLIC NETWORK//PHOSPHOTRANSFERASE SYSTEM 5379
1373 1                   FLUX BALANCE ANALYSIS//METABOLIC NETWORK//CONSTRAINT BASED MODELING 2703

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 FLUX BALANCE ANALYSIS authKW 1249146 7% 60% 179
2 METABOLIC NETWORK authKW 944974 7% 42% 195
3 CONSTRAINT BASED MODELING authKW 597322 3% 70% 73
4 ELEMENTARY FLUX MODES authKW 362743 2% 68% 46
5 GENOME SCALE METABOLIC MODEL authKW 333234 2% 53% 54
6 ELEMENTARY MODES authKW 280072 1% 78% 31
7 BMC SYSTEMS BIOLOGY journal 252887 7% 11% 190
8 METABOLIC MODELING authKW 180851 2% 29% 53
9 GENOME SCALE MODEL authKW 176695 1% 63% 24
10 METABOLIC NETWORK RECONSTRUCTION authKW 131345 0% 87% 13

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 119073 39% 1% 1046
2 Biotechnology & Applied Microbiology 22213 39% 0% 1043
3 Biochemical Research Methods 19808 29% 0% 777
4 Biochemistry & Molecular Biology 1270 21% 0% 581
5 Biology 981 6% 0% 163
6 Genetics & Heredity 322 6% 0% 161
7 Computer Science, Interdisciplinary Applications 311 4% 0% 96
8 Microbiology 274 6% 0% 153
9 Multidisciplinary Sciences 118 1% 0% 38
10 Biophysics 96 3% 0% 89

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 COMPUTAT SYST BIOTECHNOL 100183 1% 45% 19
2 BIOINFORMAT TUEBINGEN ZBIT 69226 1% 42% 14
3 METAB BIOMOL ENGN 65903 1% 18% 32
4 SYST BIOL MATH MODELING GRP 58572 1% 36% 14
5 MANCHESTER INTEGRAT SYST BIOL 53720 1% 14% 32
6 ARTIFICIAL INTELLIGENCE BIOINFORMAT GRP 49238 0% 33% 13
7 CELL SYST MODELLING GRP 46632 0% 100% 4
8 IND ENGN MECH ENGN COMP SCI 41940 1% 20% 18
9 NOVO NORDISK FDN BIOSUSTAINABIL 41212 1% 10% 35
10 LUXEMBOURG SYST BIOMED 37962 1% 11% 30

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BMC SYSTEMS BIOLOGY 252887 7% 11% 190
2 BIOINFORMATICS 76660 10% 2% 272
3 MOLECULAR SYSTEMS BIOLOGY 51195 2% 7% 59
4 METABOLIC ENGINEERING 35961 2% 5% 59
5 PLOS COMPUTATIONAL BIOLOGY 33368 4% 2% 120
6 BMC BIOINFORMATICS 21612 4% 2% 121
7 IEE PROCEEDINGS SYSTEMS BIOLOGY 14028 0% 12% 10
8 BRIEFINGS IN BIOINFORMATICS 12036 1% 4% 28
9 CURRENT OPINION IN BIOTECHNOLOGY 8882 2% 2% 43
10 BIOTECHNOLOGY JOURNAL 7199 1% 2% 26

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 FLUX BALANCE ANALYSIS 1249146 7% 60% 179 Search FLUX+BALANCE+ANALYSIS Search FLUX+BALANCE+ANALYSIS
2 METABOLIC NETWORK 944974 7% 42% 195 Search METABOLIC+NETWORK Search METABOLIC+NETWORK
3 CONSTRAINT BASED MODELING 597322 3% 70% 73 Search CONSTRAINT+BASED+MODELING Search CONSTRAINT+BASED+MODELING
4 ELEMENTARY FLUX MODES 362743 2% 68% 46 Search ELEMENTARY+FLUX+MODES Search ELEMENTARY+FLUX+MODES
5 GENOME SCALE METABOLIC MODEL 333234 2% 53% 54 Search GENOME+SCALE+METABOLIC+MODEL Search GENOME+SCALE+METABOLIC+MODEL
6 ELEMENTARY MODES 280072 1% 78% 31 Search ELEMENTARY+MODES Search ELEMENTARY+MODES
7 METABOLIC MODELING 180851 2% 29% 53 Search METABOLIC+MODELING Search METABOLIC+MODELING
8 GENOME SCALE MODEL 176695 1% 63% 24 Search GENOME+SCALE+MODEL Search GENOME+SCALE+MODEL
9 METABOLIC NETWORK RECONSTRUCTION 131345 0% 87% 13 Search METABOLIC+NETWORK+RECONSTRUCTION Search METABOLIC+NETWORK+RECONSTRUCTION
10 SYSTEMS BIOLOGY 126513 7% 5% 200 Search SYSTEMS+BIOLOGY Search SYSTEMS+BIOLOGY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 16831 METABOLIC FLUX ANALYSIS//METAB ENGN SYST BIOL//C 13 LABELING EXPERIMENT
2 9078 METABOLIC CONTROL ANALYSIS//BIOCHEMICAL SYSTEMS THEORY//S SYSTEM
3 24445 CYBERNETIC MODEL//SUBSTITUTABLE SUBSTRATES//DYNAMIC METABOLIC MODEL
4 19519 ESSENTIAL GENES//TN SEQ//MINIMAL GENOME
5 9272 GENE SET ANALYSIS//BMC BIOINFORMATICS//BIOINFORMATICS
6 7048 METABOLIC ENGINEERING//BIORENEWABLE CHEMICALS//ISOBUTANOL
7 18140 NETWORK MOTIFS//TRIANGLE COUNTING//TRIANGLE LISTING
8 5612 METABOLOMICS//RAPID SAMPLING//METABOLITE ANNOTATION
9 37004 OPERON PREDICTION//CONSERVED GENE PAIR//OPERON
10 9647 CHEMICAL REACTION NETWORKS//MASS ACTION KINETICS//ULTRASENSITIVITY

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