Class information for:
Level 1: GENE REGULATORY NETWORK//NETWORK INFERENCE//MATHEMATICAL & COMPUTATIONAL BIOLOGY

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
393 3       METABOLOMICS//METABONOMICS//ATP SYNTHASE 32518
954 2             BOOLEAN NETWORKS//GENE REGULATORY NETWORK//GENETIC REGULATORY NETWORKS 11077
5342 1                   GENE REGULATORY NETWORK//NETWORK INFERENCE//MATHEMATICAL & COMPUTATIONAL BIOLOGY 1667

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 GENE REGULATORY NETWORK authKW 596548 10% 18% 173
2 NETWORK INFERENCE authKW 345624 3% 38% 48
3 MATHEMATICAL & COMPUTATIONAL BIOLOGY WoSSC 131697 52% 1% 862
4 REVERSE ENGINEERING authKW 121686 5% 8% 85
5 GENE NETWORKS authKW 121613 4% 10% 62
6 DREAM CHALLENGE authKW 113428 0% 100% 6
7 BIOINFORMATICS journal 92972 14% 2% 235
8 BMC SYSTEMS BIOLOGY journal 83964 5% 5% 86
9 COMPUTAT BIOL MACHINE LEARNING address 80530 1% 30% 14
10 GENE NETWORK INFERENCE authKW 75614 0% 67% 6

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 131697 52% 1% 862
2 Biochemical Research Methods 25228 41% 0% 681
3 Biotechnology & Applied Microbiology 15290 41% 0% 678
4 Statistics & Probability 2610 10% 0% 168
5 Computer Science, Interdisciplinary Applications 1697 9% 0% 153
6 Computer Science, Artificial Intelligence 726 6% 0% 101
7 Genetics & Heredity 710 10% 0% 164
8 Biology 345 5% 0% 79
9 Biochemistry & Molecular Biology 298 15% 0% 256
10 Mathematics, Interdisciplinary Applications 271 3% 0% 56

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 COMPUTAT BIOL MACHINE LEARNING 80530 1% 30% 14
2 SYST BIOL BIOCHEM MOL BIOPHYS 56714 0% 100% 3
3 BIOENVIRONM INTEGRAT BIOSCI 37809 0% 100% 2
4 JBI 37805 0% 50% 4
5 BONN AACHEN INT IT 28937 0% 22% 7
6 KNOWLEDGE DISCOVERY BIOINFORMAT GRP 28354 0% 50% 3
7 JOINT SYST BIOL 27484 0% 18% 8
8 COMPUTAT ASTROBIOL FUNDAMENTAL BIOL 25205 0% 67% 2
9 INFECT DIS MOL MEDMED 25205 0% 67% 2
10 INFORMAT DECIS ALGORITHMS S 25205 0% 67% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BIOINFORMATICS 92972 14% 2% 235
2 BMC SYSTEMS BIOLOGY 83964 5% 5% 86
3 BMC BIOINFORMATICS 54881 9% 2% 151
4 IET SYSTEMS BIOLOGY 39666 2% 8% 27
5 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 35551 3% 4% 48
6 JOURNAL OF COMPUTATIONAL BIOLOGY 23602 3% 3% 45
7 STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY 11654 1% 3% 18
8 INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS 7993 1% 3% 14
9 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 4719 1% 3% 10
10 CURRENT BIOINFORMATICS 3903 1% 2% 10

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 GENE REGULATORY NETWORK 596548 10% 18% 173 Search GENE+REGULATORY+NETWORK Search GENE+REGULATORY+NETWORK
2 NETWORK INFERENCE 345624 3% 38% 48 Search NETWORK+INFERENCE Search NETWORK+INFERENCE
3 REVERSE ENGINEERING 121686 5% 8% 85 Search REVERSE+ENGINEERING Search REVERSE+ENGINEERING
4 GENE NETWORKS 121613 4% 10% 62 Search GENE+NETWORKS Search GENE+NETWORKS
5 DREAM CHALLENGE 113428 0% 100% 6 Search DREAM+CHALLENGE Search DREAM+CHALLENGE
6 GENE NETWORK INFERENCE 75614 0% 67% 6 Search GENE+NETWORK+INFERENCE Search GENE+NETWORK+INFERENCE
7 GENE EXPRESSION DATA 62807 2% 11% 31 Search GENE+EXPRESSION+DATA Search GENE+EXPRESSION+DATA
8 MULTIPLE CHANGEPOINT PROCESS 56714 0% 100% 3 Search MULTIPLE+CHANGEPOINT+PROCESS Search MULTIPLE+CHANGEPOINT+PROCESS
9 NESTED EFFECTS MODELS 56714 0% 100% 3 Search NESTED+EFFECTS+MODELS Search NESTED+EFFECTS+MODELS
10 NETGENERATOR 56714 0% 100% 3 Search NETGENERATOR Search NETGENERATOR

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 22518 DIALYSIS BIOREACTOR//DOUBLE THYMIDINE BLOCK//JUST IN TIME ASSEMBLY
2 5349 BOOLEAN NETWORKS//SEMI TENSOR PRODUCT//BOOLEAN CONTROL NETWORK
3 18140 NETWORK MOTIFS//TRIANGLE COUNTING//TRIANGLE LISTING
4 15781 WEIGHTED GENE CO EXPRESSION NETWORK ANALYSIS//GENE CO EXPRESSION NETWORK//CO EXPRESSION NETWORK ANALYSIS
5 2260 GENE SELECTION//CANCER CLASSIFICATION//BICLUSTERING
6 24374 GENETIC REGULATORY NETWORKS//GENETIC REGULATORY NETWORKS GRNS//CONTROL SYST BIOL
7 14854 GAUSSIAN GRAPHICAL MODEL//PRECISION MATRIX//GRAPHICAL LASSO
8 2027 MOTIF DISCOVERY//TRANSCRIPTION FACTOR BINDING SITE//MOTIF FINDING
9 594 PROTEIN INTERACTION NETWORK//PROTEIN PROTEIN INTERACTION NETWORK//ESSENTIAL PROTEINS
10 9272 GENE SET ANALYSIS//BMC BIOINFORMATICS//BIOINFORMATICS

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