Class information for:
Level 1: MARKOV STATE MODEL//ENHANCED SAMPLING//IST SCI COMPUTAZ

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
6 4 CHEMISTRY, ORGANIC//CHEMISTRY, INORGANIC & NUCLEAR//CHEMISTRY, MULTIDISCIPLINARY 1698077
156 3       PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN FOLDING//PROTEIN STRUCTURE PREDICTION 63028
2461 2             HP MODEL//ENHANCED SAMPLING//JOURNAL OF CHEMICAL THEORY AND COMPUTATION 4231
6229 1                   MARKOV STATE MODEL//ENHANCED SAMPLING//IST SCI COMPUTAZ 1538

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MARKOV STATE MODEL authKW 294689 2% 55% 26
2 ENHANCED SAMPLING authKW 199132 2% 36% 27
3 IST SCI COMPUTAZ address 180395 1% 46% 19
4 TRANSITION PATH SAMPLING authKW 148731 1% 52% 14
5 JOURNAL OF CHEMICAL THEORY AND COMPUTATION journal 133915 12% 4% 179
6 TRANSITION PATH THEORY authKW 100399 0% 70% 7
7 METADYNAMICS authKW 89310 1% 20% 22
8 MILESTONING authKW 85375 0% 83% 5
9 ACTION DERIVED MOLECULAR DYNAMICS authKW 81962 0% 100% 4
10 HYPER MOLECULAR DYNAMICS authKW 81962 0% 100% 4

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Physics, Atomic, Molecular & Chemical 23666 49% 0% 746
2 Chemistry, Physical 12428 59% 0% 907
3 Physics, Mathematical 1117 8% 0% 125
4 Computer Science, Interdisciplinary Applications 281 4% 0% 66
5 Mathematical & Computational Biology 185 2% 0% 36
6 Physics, Fluids & Plasmas 171 3% 0% 48
7 Chemistry, Multidisciplinary 158 10% 0% 148
8 Biophysics 141 5% 0% 70
9 Physics, Multidisciplinary 133 6% 0% 92
10 Mathematics, Interdisciplinary Applications 53 2% 0% 28

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 IST SCI COMPUTAZ 180395 1% 46% 19
2 SIMBIOS NIH BIOMED COMPUTAT 73761 0% 60% 6
3 MATH COMP SCI BIOINFORMAT 64029 0% 63% 5
4 COMPUTAT BIOPHYS GRIB IMIM 59052 0% 41% 7
5 SCI COMPUTAZ 54638 0% 67% 4
6 MICMAC PROJECT TEAM 40973 0% 33% 6
7 BIOMOL PHYS MODELING GRP 29103 1% 16% 9
8 CHEM PL BIOSCI 28515 4% 2% 67
9 PHYS CHIM MAT STRASBOURG UMR 7504 27319 0% 67% 2
10 MATHEON 27315 0% 33% 4

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF CHEMICAL THEORY AND COMPUTATION 133915 12% 4% 179
2 JOURNAL OF CHEMICAL PHYSICS 37864 26% 0% 401
3 JOURNAL OF PHYSICAL CHEMISTRY B 7563 8% 0% 121
4 MULTISCALE MODELING & SIMULATION 7136 1% 2% 17
5 JOURNAL OF COMPUTATIONAL CHEMISTRY 6247 3% 1% 44
6 WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 3473 0% 2% 7
7 MOLECULAR SIMULATION 2432 1% 1% 18
8 REVIEWS IN COMPUTATIONAL CHEMISTRY 2389 0% 4% 3
9 CURRENT OPINION IN STRUCTURAL BIOLOGY 1692 1% 1% 14
10 JOURNAL OF CHEMICAL INFORMATION AND MODELING 1585 1% 0% 16

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 MARKOV STATE MODEL 294689 2% 55% 26 Search MARKOV+STATE+MODEL Search MARKOV+STATE+MODEL
2 ENHANCED SAMPLING 199132 2% 36% 27 Search ENHANCED+SAMPLING Search ENHANCED+SAMPLING
3 TRANSITION PATH SAMPLING 148731 1% 52% 14 Search TRANSITION+PATH+SAMPLING Search TRANSITION+PATH+SAMPLING
4 TRANSITION PATH THEORY 100399 0% 70% 7 Search TRANSITION+PATH+THEORY Search TRANSITION+PATH+THEORY
5 METADYNAMICS 89310 1% 20% 22 Search METADYNAMICS Search METADYNAMICS
6 MILESTONING 85375 0% 83% 5 Search MILESTONING Search MILESTONING
7 ACTION DERIVED MOLECULAR DYNAMICS 81962 0% 100% 4 Search ACTION+DERIVED+MOLECULAR+DYNAMICS Search ACTION+DERIVED+MOLECULAR+DYNAMICS
8 HYPER MOLECULAR DYNAMICS 81962 0% 100% 4 Search HYPER+MOLECULAR+DYNAMICS Search HYPER+MOLECULAR+DYNAMICS
9 TRANSITION INTERFACE SAMPLING 81962 0% 100% 4 Search TRANSITION+INTERFACE+SAMPLING Search TRANSITION+INTERFACE+SAMPLING
10 ACCELERATED MOLECULAR DYNAMICS 77631 1% 32% 12 Search ACCELERATED+MOLECULAR+DYNAMICS Search ACCELERATED+MOLECULAR+DYNAMICS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 6490 GENERALIZED ENSEMBLE ALGORITHM//REPLICA EXCHANGE METHOD//SOFT MATTER SYST GRP
2 14279 GRADIENT EXTREMAL//VALLEY RIDGE INFLECTION POINT//NEWTON TRAJECTORY
3 4262 FREE ENERGY CALCULATIONS//FREE ENERGY PERTURBATION//THERMODYNAMIC INTEGRATION
4 5300 ELASTIC NETWORK MODEL//NORMAL MODE ANALYSIS//GAUSSIAN NETWORK MODEL
5 536 PROTEIN FOLDING//PHI VALUE//FOLDING RATE
6 21460 MULTIPLE TIME STEP//SHAKE//SYMPLECTIC INTEGRATION METHODS
7 20601 CRITICAL DROPLET//METASTABILITY//KAWASAKI DYNAMICS
8 3975 BETA HAIRPIN//ALPHA HELIX//SIDE CHAIN INTERACTIONS
9 9787 ACTIVATED RATE PROCESSES//EQUIPE RECH ELECT SIGNAUX SYST ESS//KRAMERS TURNOVER
10 12016 GREEN KUBO FORMALISM//ADV MAT EDUC CHINA//COLLOIDAL EPITAXY

Go to start page