Class information for:
Level 2: HP MODEL//ENHANCED SAMPLING//JOURNAL OF CHEMICAL THEORY AND COMPUTATION

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
6 4 CHEMISTRY, ORGANIC//CHEMISTRY, INORGANIC & NUCLEAR//CHEMISTRY, MULTIDISCIPLINARY 1698077
156 3       PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN FOLDING//PROTEIN STRUCTURE PREDICTION 63028
2461 2             HP MODEL//ENHANCED SAMPLING//JOURNAL OF CHEMICAL THEORY AND COMPUTATION 4231
6229 1                   MARKOV STATE MODEL//ENHANCED SAMPLING//IST SCI COMPUTAZ 1538
6490 1                   GENERALIZED ENSEMBLE ALGORITHM//REPLICA EXCHANGE METHOD//SOFT MATTER SYST GRP 1507
14279 1                   GRADIENT EXTREMAL//VALLEY RIDGE INFLECTION POINT//NEWTON TRAJECTORY 811
23243 1                   HP MODEL//AB OFF LATTICE MODEL//PROTEIN FOLDING PROBLEM 375

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 HP MODEL authKW 195498 1% 69% 38
2 ENHANCED SAMPLING authKW 175120 1% 56% 42
3 JOURNAL OF CHEMICAL THEORY AND COMPUTATION journal 143895 7% 6% 308
4 GENERALIZED ENSEMBLE ALGORITHM authKW 112009 0% 79% 19
5 REPLICA EXCHANGE METHOD authKW 107219 1% 60% 24
6 MARKOV STATE MODEL authKW 107089 1% 55% 26
7 SOFT MATTER SYST GRP address 100335 0% 84% 16
8 GRADIENT EXTREMAL authKW 97307 0% 93% 14
9 VALLEY RIDGE INFLECTION POINT authKW 93084 0% 83% 15
10 MULTICANONICAL SIMULATION authKW 82489 0% 92% 12

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Physics, Atomic, Molecular & Chemical 41148 39% 0% 1644
2 Chemistry, Physical 22660 49% 0% 2061
3 Physics, Mathematical 7212 12% 0% 510
4 Computer Science, Interdisciplinary Applications 2393 7% 0% 297
5 Physics, Fluids & Plasmas 1888 6% 0% 240
6 Physics, Multidisciplinary 699 8% 0% 319
7 Chemistry, Multidisciplinary 629 11% 0% 459
8 Mathematical & Computational Biology 546 2% 0% 102
9 Biophysics 385 5% 0% 192
10 Mathematics, Interdisciplinary Applications 346 3% 0% 107

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 SOFT MATTER SYST GRP 100335 0% 84% 16
2 THEORET SCI NTZ 73850 1% 40% 25
3 IST SCI COMPUTAZ 65551 0% 46% 19
4 SIMULAT PHYS 56196 1% 13% 58
5 ADV SIMULAT IAS 2 37236 0% 100% 5
6 FUNCT MOL SCI 35424 1% 13% 38
7 FESTKORPERFOR IFF 2 29789 0% 100% 4
8 SIMBIOS NIH BIOMED COMPUTAT 26805 0% 60% 6
9 THEORET STUDIES 24237 1% 6% 58
10 MATH COMP SCI BIOINFORMAT 23269 0% 63% 5

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF CHEMICAL THEORY AND COMPUTATION 143895 7% 6% 308
2 JOURNAL OF CHEMICAL PHYSICS 61750 20% 1% 852
3 JOURNAL OF COMPUTATIONAL CHEMISTRY 37329 4% 3% 178
4 COMPUTER PHYSICS COMMUNICATIONS 10518 2% 1% 104
5 MOLECULAR SIMULATION 8267 1% 2% 55
6 PHYSICAL REVIEW E 7410 6% 0% 238
7 JOURNAL OF PHYSICAL CHEMISTRY B 7354 5% 1% 200
8 THEORETICA CHIMICA ACTA 5111 1% 2% 31
9 INTERNATIONAL JOURNAL OF MODERN PHYSICS C 4864 1% 1% 45
10 THEORETICAL CHEMISTRY ACCOUNTS 3120 1% 1% 35

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 HP MODEL 195498 1% 69% 38 Search HP+MODEL Search HP+MODEL
2 ENHANCED SAMPLING 175120 1% 56% 42 Search ENHANCED+SAMPLING Search ENHANCED+SAMPLING
3 GENERALIZED ENSEMBLE ALGORITHM 112009 0% 79% 19 Search GENERALIZED+ENSEMBLE+ALGORITHM Search GENERALIZED+ENSEMBLE+ALGORITHM
4 REPLICA EXCHANGE METHOD 107219 1% 60% 24 Search REPLICA+EXCHANGE+METHOD Search REPLICA+EXCHANGE+METHOD
5 MARKOV STATE MODEL 107089 1% 55% 26 Search MARKOV+STATE+MODEL Search MARKOV+STATE+MODEL
6 GRADIENT EXTREMAL 97307 0% 93% 14 Search GRADIENT+EXTREMAL Search GRADIENT+EXTREMAL
7 VALLEY RIDGE INFLECTION POINT 93084 0% 83% 15 Search VALLEY+RIDGE+INFLECTION+POINT Search VALLEY+RIDGE+INFLECTION+POINT
8 MULTICANONICAL SIMULATION 82489 0% 92% 12 Search MULTICANONICAL+SIMULATION Search MULTICANONICAL+SIMULATION
9 NEWTON TRAJECTORY 82489 0% 92% 12 Search NEWTON+TRAJECTORY Search NEWTON+TRAJECTORY
10 GENERALIZED ENSEMBLE 81085 0% 78% 14 Search GENERALIZED+ENSEMBLE Search GENERALIZED+ENSEMBLE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 924 PROTEIN FOLDING//MOLTEN GLOBULE//FOLDING INTERMEDIATE
2 3902 CRITICAL DROPLET//METASTABILITY//DYNAMIC PHASE TRANSITION
3 1871 DISSIPATIVE PARTICLE DYNAMICS//MOLECULAR SIMULATION//REAXFF
4 269 PHYSICS, ATOMIC, MOLECULAR & CHEMICAL//JOURNAL OF CHEMICAL THEORY AND COMPUTATION//JOURNAL OF COMPUTATIONAL CHEMISTRY
5 318 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//JOURNAL OF CHEMICAL INFORMATION AND MODELING
6 1521 SURFACE DIFFUSION//SURFACE INDUCED DISSOCIATION//LIQUID SUBSTRATE
7 3437 KS PITZER THEORET CHEM//SETTLING CHAMBER//COMBUST ENERGY FRONTIER
8 1005 PEPTAIBOL//PEPTIDOMIMETICS//FOLDAMERS
9 2355 FLUCTUATION THEOREM//CELL VIRUS THEORY//LARGE DEVIATIONS IN NON EQUILIBRIUM SYSTEMS
10 281 ISING MODEL//JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL//PHYSICS, MATHEMATICAL

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