Class information for:
Level 1: SERIAL ANALYSIS OF GENE EXPRESSION//SAGE//GLGI

Basic class information

Class id #P Avg. number of
references
Database coverage
of references
16034 677 35.4 87%



Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.



Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
2924 2             SAGE//SERIAL ANALYSIS OF GENE EXPRESSION//DIFFERENTIAL DISPLAY 2737
16034 1                   SERIAL ANALYSIS OF GENE EXPRESSION//SAGE//GLGI 677

Terms with highest relevance score



rank Term termType Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 SERIAL ANALYSIS OF GENE EXPRESSION authKW 561554 6% 30% 41
2 SAGE authKW 511656 12% 14% 79
3 GLGI authKW 180410 1% 100% 4
4 SERIAL ANALYSIS OF GENE EXPRESSION SAGE authKW 169367 2% 29% 13
5 TAISHO FUNCT GENOM address 145479 1% 32% 10
6 SAGE TECHNIQUE authKW 135308 0% 100% 3
7 ENH address 93948 1% 21% 10
8 ADAPTER TAGGED COMPETITIVE PCR authKW 90205 0% 100% 2
9 ADAPTOR TAGGED COMPETITIVE POLYMERASE CHAIN REACTION authKW 90205 0% 100% 2
10 DIGITAL GENE EXPRESSION DISPLAYER authKW 90205 0% 100% 2

Web of Science journal categories



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 Biotechnology & Applied Microbiology 3009 29% 0% 195
2 Genetics & Heredity 2797 27% 0% 185
3 Mathematical & Computational Biology 1392 9% 0% 58
4 Biochemical Research Methods 831 12% 0% 84
5 Biochemistry & Molecular Biology 771 31% 0% 207
6 Ophthalmology 194 5% 0% 35
7 Cell Biology 158 10% 0% 66
8 Information Science & Library Science 107 2% 0% 15
9 Oncology 82 8% 0% 53
10 Multidisciplinary Sciences 35 1% 0% 10

Address terms



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 TAISHO FUNCT GENOM 145479 1% 32% 10
2 ENH 93948 1% 21% 10
3 EQUIPE SIGNALISAT IDENT CELLULAI 90205 0% 100% 2
4 FUNCT GENOM ANAT PHYSIOL 90205 0% 100% 2
5 IMAGE CONSORTIUM 67651 0% 50% 3
6 MOL ENDOCRINOL ONCOL ANAT PHYSIO 60135 0% 67% 2
7 AGR ENVIRONM SCI GENOM IL 45103 0% 100% 1
8 ANAT PHYSIOLCHUL 45103 0% 100% 1
9 ANAT PHYSIOLFUNCT GENOM 45103 0% 100% 1
10 AXIS TEAM PROJECT 45103 0% 100% 1

Journals



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 BMC GENOMICS 6414 5% 0% 37
2 BIOTECHFORUM ( BTF ) 6268 3% 1% 19
3 GENOMICS 4242 4% 0% 28
4 SCIENTIST 4157 2% 1% 15
5 PHYSIOLOGICAL GENOMICS 4092 2% 1% 13
6 BMC BIOINFORMATICS 4027 4% 0% 26
7 MOLECULAR VISION 3065 2% 0% 15
8 CURRENT PHARMACEUTICAL BIOTECHNOLOGY 2113 1% 1% 8
9 BIOINFORMATICS 2017 3% 0% 22
10 GENOME BIOLOGY 1811 2% 0% 11

Author Key Words



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
LCSH search Wikipedia search
1 SERIAL ANALYSIS OF GENE EXPRESSION 561554 6% 30% 41 Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION
2 SAGE 511656 12% 14% 79 Search SAGE Search SAGE
3 GLGI 180410 1% 100% 4 Search GLGI Search GLGI
4 SERIAL ANALYSIS OF GENE EXPRESSION SAGE 169367 2% 29% 13 Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION+SAGE Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION+SAGE
5 SAGE TECHNIQUE 135308 0% 100% 3 Search SAGE+TECHNIQUE Search SAGE+TECHNIQUE
6 ADAPTER TAGGED COMPETITIVE PCR 90205 0% 100% 2 Search ADAPTER+TAGGED+COMPETITIVE+PCR Search ADAPTER+TAGGED+COMPETITIVE+PCR
7 ADAPTOR TAGGED COMPETITIVE POLYMERASE CHAIN REACTION 90205 0% 100% 2 Search ADAPTOR+TAGGED+COMPETITIVE+POLYMERASE+CHAIN+REACTION Search ADAPTOR+TAGGED+COMPETITIVE+POLYMERASE+CHAIN+REACTION
8 DIGITAL GENE EXPRESSION DISPLAYER 90205 0% 100% 2 Search DIGITAL+GENE+EXPRESSION+DISPLAYER Search DIGITAL+GENE+EXPRESSION+DISPLAYER
9 HEPATOMA ASSOCIATED GENE 90205 0% 100% 2 Search HEPATOMA+ASSOCIATED+GENE Search HEPATOMA+ASSOCIATED+GENE
10 LONG SERIAL ANALYSIS OF GENE EXPRESSION LONGSAGE 90205 0% 100% 2 Search LONG+SERIAL+ANALYSIS+OF+GENE+EXPRESSION+LONGSAGE Search LONG+SERIAL+ANALYSIS+OF+GENE+EXPRESSION+LONGSAGE

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.



Rank Reference # ref.
in cl.
Shr. of ref. in
cl.
Citations
1 ANISIMOV, SV , (2008) SERIAL ANALYSIS OF GENE EXPRESSION (SAGE): 13 YEARS OF APPLICATION IN RESEARCH.CURRENT PHARMACEUTICAL BIOTECHNOLOGY. VOL. 9. ISSUE 5. P. 338-350 86 67% 37
2 WANG, SM , (2007) UNDERSTANDING SAGE DATA.TRENDS IN GENETICS. VOL. 23. ISSUE 1. P. 42 -50 33 70% 49
3 WANG, HY , ZHENG, HR , AZUAJE, F , (2008) CLUSTERING-BASED APPROACHES TO SAGE DATA MINING.BIODATA MINING. VOL. 1. ISSUE . P. - 31 76% 5
4 TUTEJA, R , TUTEJA, N , (2004) SERIAL ANALYSIS OF GENE EXPRESSION (SAGE): UNRAVELING THE BIOINFORMATICS TOOLS.BIOESSAYS. VOL. 26. ISSUE 8. P. 916-922 29 78% 16
5 HU, M , POLYAK, K , (2006) SERIAL ANALYSIS OF GENE EXPRESSION.NATURE PROTOCOLS. VOL. 1. ISSUE 4. P. 1743 -1760 39 53% 14
6 XU, WJ , WANG, ZX , QIAO, ZD , (2009) MODIFIED PCR METHODS FOR 3' END AMPLIFICATION FROM SERIAL ANALYSIS OF GENE EXPRESSION (SAGE) TAGS.FEBS JOURNAL. VOL. 276. ISSUE 10. P. 2657 -2668 28 67% 1
7 BARTLETT, J , (2001) TECHNOLOGY EVALUATION: SAGE, GENZYME MOLECULAR ONCOLOGY.CURRENT OPINION IN MOLECULAR THERAPEUTICS. VOL. 3. ISSUE 1. P. 85 -96 40 51% 14
8 VEGA-SANCHEZ, ME , GOWDA, M , WANG, GL , (2007) TAG-BASED APPROACHES FOR DEEP TRANSCRIPTOME ANALYSIS IN PLANTS.PLANT SCIENCE. VOL. 173. ISSUE 4. P. 371-380 32 53% 7
9 PATINO, WD , MIAN, OY , HWANG, PM , (2002) SERIAL ANALYSIS OF GENE EXPRESSION - TECHNICAL CONSIDERATIONS AND APPLICATIONS TO CARDIOVASCULAR BIOLOGY.CIRCULATION RESEARCH. VOL. 91. ISSUE 7. P. 565 -569 27 69% 30
10 POROYKO, V , HEJLEK, LG , SPOLLEN, WG , SPRINGER, GK , NGUYEN, HT , SHARP, RE , BOHNERT, HJ , (2005) THE MAIZE ROOT TRANSCRIPTOME BY SERIAL ANALYSIS OF GENE EXPRESSION.PLANT PHYSIOLOGY. VOL. 138. ISSUE 3. P. 1700 -1710 24 69% 44

Classes with closest relation at Level 1



Rank Class id link
1 15262 SMART CDNA LIBRARY//GENOME EXPLORAT GRPTSURUMI KU//EXPRESSED SEQUENCE TAGS
2 10241 DIFFERENTIAL DISPLAY//MRNA DIFFERENTIAL DISPLAY//ANIM NUTR FEED YUNNAN PROV
3 19074 NATURAL ANTISENSE TRANSCRIPT//WRAP53//OVERLAPPING GENES
4 7400 RNA SEQ//TRANSCRIPTOME ASSEMBLY//RNA SEQUENCING
5 35565 MKIAA//ATAD3//ATAD3A
6 11368 RNA AMPLIFICATION//LASER CAPTURE MICRODISSECTION//LASER MICRODISSECTION
7 29800 CXC DOMAIN//TESTIS SPECIFIC GENE//NORPEG
8 37162 UNIT HISTOL EMBRYOL PL BIOL//CAENORHABDITIS ELEGANS OLFACTORY NEURONS//CODONOME
9 2901 BMC BIOINFORMATICS//MICROARRAY IMAGE//BIOINFORMATICS
10 3649 SEQUENCING BY HYBRIDIZATION//DNA CHIP//DNA GRAPHS

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