Class information for:
Level 2: SAGE//SERIAL ANALYSIS OF GENE EXPRESSION//DIFFERENTIAL DISPLAY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2924 2737 28.7 84%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
2924 2             SAGE//SERIAL ANALYSIS OF GENE EXPRESSION//DIFFERENTIAL DISPLAY 2737
10241 1                   DIFFERENTIAL DISPLAY//MRNA DIFFERENTIAL DISPLAY//ANIM NUTR FEED YUNNAN PROV 1079
15262 1                   SMART CDNA LIBRARY//GENOME EXPLORAT GRPTSURUMI KU//EXPRESSED SEQUENCE TAGS 722
16034 1                   SERIAL ANALYSIS OF GENE EXPRESSION//SAGE//GLGI 677
35335 1                   HUASHAN HOSP ENDOCRINOL//THY28//IN IDUALIZED MEDICAT 99
35565 1                   MKIAA//ATAD3//ATAD3A 95
37162 1                   UNIT HISTOL EMBRYOL PL BIOL//CAENORHABDITIS ELEGANS OLFACTORY NEURONS//CODONOME 65

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SAGE authKW 164127 3% 16% 90
2 SERIAL ANALYSIS OF GENE EXPRESSION authKW 159907 2% 33% 44
3 DIFFERENTIAL DISPLAY authKW 156996 4% 12% 118
4 MRNA DIFFERENTIAL DISPLAY authKW 106810 1% 24% 40
5 ANIM NUTR FEED YUNNAN PROV address 80946 1% 48% 15
6 BLACK BONED SHEEP authKW 75290 0% 75% 9
7 MKIAA authKW 71387 0% 80% 8
8 TAISHO FUNCT GENOM address 60796 0% 42% 13
9 ATAD3 authKW 57365 0% 86% 6
10 EXPRESSED SEQUENCE TAGS authKW 53299 3% 7% 70

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Genetics & Heredity 8245 24% 0% 645
2 Biotechnology & Applied Microbiology 6299 21% 0% 580
3 Biochemistry & Molecular Biology 5782 40% 0% 1085
4 Biochemical Research Methods 5457 16% 0% 425
5 Mathematical & Computational Biology 1870 5% 0% 139
6 Cell Biology 433 8% 0% 231
7 Plant Sciences 317 6% 0% 173
8 Biophysics 187 4% 0% 113
9 Oncology 70 5% 0% 134
10 Biology 62 2% 0% 57

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ANIM NUTR FEED YUNNAN PROV 80946 1% 48% 15
2 TAISHO FUNCT GENOM 60796 0% 42% 13
3 GENOME EXPLORAT GRPTSURUMI KU 40091 0% 28% 13
4 GENOME EXPLORAT GRP 31836 1% 14% 20
5 UNIT HISTOL EMBRYOL PL BIOL 30357 0% 39% 7
6 IMAGE CONSORTIUM 29743 0% 67% 4
7 MOL GERONTOL UNIT 29743 0% 67% 4
8 GENOM INFORMAT OURCE EXPLORAT 25493 0% 57% 4
9 INTEGRATED DATABASE SYST BIOL TEAM 25097 0% 75% 3
10 ENH 23223 0% 21% 10

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOTECHNIQUES 23372 4% 2% 113
2 BIOTECHFORUM ( BTF ) 19263 2% 3% 67
3 DNA RESEARCH 17899 1% 5% 32
4 NUCLEIC ACIDS RESEARCH 10630 7% 1% 196
5 GENOMICS 9629 3% 1% 85
6 MOLECULAR BIOTECHNOLOGY 4680 1% 2% 28
7 BMC GENOMICS 4674 2% 1% 64
8 BIOINFORMATICS 4594 2% 1% 67
9 BMC BIOINFORMATICS 3486 2% 1% 49
10 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS 2632 1% 1% 29

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SAGE 164127 3% 16% 90 Search SAGE Search SAGE
2 SERIAL ANALYSIS OF GENE EXPRESSION 159907 2% 33% 44 Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION
3 DIFFERENTIAL DISPLAY 156996 4% 12% 118 Search DIFFERENTIAL+DISPLAY Search DIFFERENTIAL+DISPLAY
4 MRNA DIFFERENTIAL DISPLAY 106810 1% 24% 40 Search MRNA+DIFFERENTIAL+DISPLAY Search MRNA+DIFFERENTIAL+DISPLAY
5 BLACK BONED SHEEP 75290 0% 75% 9 Search BLACK+BONED+SHEEP Search BLACK+BONED+SHEEP
6 MKIAA 71387 0% 80% 8 Search MKIAA Search MKIAA
7 ATAD3 57365 0% 86% 6 Search ATAD3 Search ATAD3
8 EXPRESSED SEQUENCE TAGS 53299 3% 7% 70 Search EXPRESSED+SEQUENCE+TAGS Search EXPRESSED+SEQUENCE+TAGS
9 SERIAL ANALYSIS OF GENE EXPRESSION SAGE 48566 1% 31% 14 Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION+SAGE Search SERIAL+ANALYSIS+OF+GENE+EXPRESSION+SAGE
10 GLGI 44619 0% 100% 4 Search GLGI Search GLGI

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 ANISIMOV, SV , (2008) SERIAL ANALYSIS OF GENE EXPRESSION (SAGE): 13 YEARS OF APPLICATION IN RESEARCH.CURRENT PHARMACEUTICAL BIOTECHNOLOGY. VOL. 9. ISSUE 5. P. 338-350 92 72% 37
2 STURTEVANT, J , (2000) APPLICATIONS OF DIFFERENTIAL-DISPLAY REVERSE TRANSCRIPTION-PCR TO MOLECULAR PATHOGENESIS AND MEDICAL MYCOLOGY.CLINICAL MICROBIOLOGY REVIEWS. VOL. 13. ISSUE 3. P. 408 -+ 89 63% 27
3 LORKOWSKI, S , CULLEN, P , (2004) HIGH-THROUGHPUT ANALYSIS OF MRNA EXPRESSION: MICROARRAYS ARE NOT THE WHOLE STORY.EXPERT OPINION ON THERAPEUTIC PATENTS. VOL. 14. ISSUE 3. P. 377-403 64 63% 4
4 SHIUE, L , (1997) IDENTIFICATION OF CANDIDATE GENES FOR DRUG DISCOVERY BY DIFFERENTIAL DISPLAY.DRUG DEVELOPMENT RESEARCH. VOL. 41. ISSUE 3-4. P. 142-159 64 66% 5
5 LIEVENS, S , GOORMACHTIG, S , HOLSTERS, M , (2001) A CRITICAL EVALUATION OF DIFFERENTIAL DISPLAY AS A TOOL TO IDENTIFY GENES INVOLVED IN LEGUME NODULATION: LOOKING BACK AND LOOKING FORWARD.NUCLEIC ACIDS RESEARCH. VOL. 29. ISSUE 17. P. 3459 -3468 56 57% 39
6 BARTLETT, J , (2001) TECHNOLOGY EVALUATION: SAGE, GENZYME MOLECULAR ONCOLOGY.CURRENT OPINION IN MOLECULAR THERAPEUTICS. VOL. 3. ISSUE 1. P. 85 -96 50 63% 14
7 ZHANG, JS , DUNCAN, EL , CHANG, ACM , REDDEL, RR , (1998) DIFFERENTIAL DISPLAY OF MRNA.MOLECULAR BIOTECHNOLOGY. VOL. 10. ISSUE 2. P. 155 -165 44 76% 36
8 WANG, SM , (2007) UNDERSTANDING SAGE DATA.TRENDS IN GENETICS. VOL. 23. ISSUE 1. P. 42 -50 33 70% 49
9 TUTEJA, R , TUTEJA, N , (2004) SERIAL ANALYSIS OF GENE EXPRESSION (SAGE): UNRAVELING THE BIOINFORMATICS TOOLS.BIOESSAYS. VOL. 26. ISSUE 8. P. 916-922 31 84% 16
10 WANG, HY , ZHENG, HR , AZUAJE, F , (2008) CLUSTERING-BASED APPROACHES TO SAGE DATA MINING.BIODATA MINING. VOL. 1. ISSUE . P. - 31 76% 5

Classes with closest relation at Level 2


Rank Class id link
1 1714 MOLECULAR BEACON//MUTATION DETECTION//SEQUENCING BY HYBRIDIZATION
2 2179 REFERENCE GENES//GENORM//NORMFINDER
3 126 MOLECULAR BIOLOGY AND EVOLUTION//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY
4 1609 RESTRICTION ENDONUCLEASE//BIOTECHNIQUES//RESTRICTION MODIFICATION SYSTEM
5 868 BMC BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS
6 1101 BIOINFORMATICS//COPY NUMBER VARIATION//NEXT GENERATION SEQUENCING
7 1143 GENOMICS//CYTOGENETICS AND CELL GENETICS//MINISATELLITE
8 2094 TRANSPOSABLE ELEMENTS//RETROTRANSPOSON//LTR RETROTRANSPOSON
9 3692 SPARC//OSTEONECTIN//JWA
10 2274 MALIGNANT HYPERTHERMIA//ANIMAL GENETICS//IN VITRO CONTRACTURE TEST

Go to start page