Class information for:
Level 1: DNMT2//ALKB//N 6 METHYLADENOSINE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
16988 624 47.8 86%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
1084 2             AMINOACYL TRNA SYNTHETASE//TRNA//AMINOACYL TRANSFER RNA SYNTHETASE 9879
16988 1                   DNMT2//ALKB//N 6 METHYLADENOSINE 624

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DNMT2 authKW 799240 3% 78% 21
2 ALKB authKW 797460 6% 44% 37
3 N 6 METHYLADENOSINE authKW 654249 3% 70% 19
4 RNA METHYLATION authKW 410794 3% 44% 19
5 N 6 METHYLADENOSINE M6A authKW 293602 1% 100% 6
6 METTL3 authKW 266413 1% 78% 7
7 NSUN2 authKW 266413 1% 78% 7
8 ALKB HOMOLOGS authKW 244668 1% 100% 5
9 ALKBH3 authKW 244668 1% 100% 5
10 ALKBH2 authKW 203888 1% 83% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 3062 58% 0% 359
2 Cell Biology 1178 23% 0% 146
3 Genetics & Heredity 657 15% 0% 91
4 Biochemical Research Methods 160 6% 0% 39
5 Biophysics 90 5% 0% 34
6 Cell & Tissue Engineering 78 1% 0% 7
7 Developmental Biology 74 3% 0% 16
8 Toxicology 59 4% 0% 23
9 Biotechnology & Applied Microbiology 37 5% 0% 30
10 Parasitiology 27 2% 0% 10

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOPHYS DYNAM 124625 8% 5% 48
2 BIG CAS OSLO GENOME COOPERAT 97867 0% 100% 2
3 ENGN SPACE BIOL 97867 0% 100% 2
4 HRINU 97867 0% 100% 2
5 MOL CELLULAR BIOCHEM BBSRB 97867 0% 100% 2
6 SUERI 97867 0% 100% 2
7 XJTLU WTNC 97867 0% 100% 2
8 CLIN DIAGNOST INTERVENT 83878 1% 29% 6
9 UBIQUITIN SIGNALLING GRP 73397 0% 50% 3
10 MICROBIOL DIAGNOST INTERVENT 65243 0% 67% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DNA REPAIR 6136 3% 1% 16
2 NUCLEIC ACIDS RESEARCH 2803 8% 0% 48
3 WILEY INTERDISCIPLINARY REVIEWS-RNA 2125 1% 1% 4
4 NATURE CHEMICAL BIOLOGY 1738 1% 1% 7
5 CELL CHEMICAL BIOLOGY 1394 0% 1% 2
6 RNA BIOLOGY 1324 1% 1% 5
7 RNA 933 1% 0% 7
8 NATURE STRUCTURAL & MOLECULAR BIOLOGY 804 1% 0% 6
9 JOURNAL OF MOLECULAR CELL BIOLOGY 735 0% 1% 2
10 CELL 713 2% 0% 15

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DNMT2 799240 3% 78% 21 Search DNMT2 Search DNMT2
2 ALKB 797460 6% 44% 37 Search ALKB Search ALKB
3 N 6 METHYLADENOSINE 654249 3% 70% 19 Search N+6+METHYLADENOSINE Search N+6+METHYLADENOSINE
4 RNA METHYLATION 410794 3% 44% 19 Search RNA+METHYLATION Search RNA+METHYLATION
5 N 6 METHYLADENOSINE M6A 293602 1% 100% 6 Search N+6+METHYLADENOSINE+M6A Search N+6+METHYLADENOSINE+M6A
6 METTL3 266413 1% 78% 7 Search METTL3 Search METTL3
7 NSUN2 266413 1% 78% 7 Search NSUN2 Search NSUN2
8 ALKB HOMOLOGS 244668 1% 100% 5 Search ALKB+HOMOLOGS Search ALKB+HOMOLOGS
9 ALKBH3 244668 1% 100% 5 Search ALKBH3 Search ALKBH3
10 ALKBH2 203888 1% 83% 5 Search ALKBH2 Search ALKBH2

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ZHAO, BXS , ROUNDTREE, IA , HE, C , (2017) POST-TRANSCRIPTIONAL GENE REGULATION BY MRNA MODIFICATIONS.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 18. ISSUE 1. P. 31 -42 87 59% 1
2 ZHENG, GQ , FU, Y , HE, C , (2014) NUCLEIC ACID OXIDATION IN DNA DAMAGE REPAIR AND EPIGENETICS.CHEMICAL REVIEWS. VOL. 114. ISSUE 8. P. 4602 -4620 111 53% 19
3 ROUNDTREE, IA , HE, C , (2016) RNA EPIGENETICS - CHEMICAL MESSAGES FOR POSTTRANSCRIPTIONAL GENE REGULATION.CURRENT OPINION IN CHEMICAL BIOLOGY. VOL. 30. ISSUE . P. 46 -51 40 93% 11
4 FEDELES, BI , SINGH, V , DELANEY, JC , LI, DY , ESSIGMANN, JM , (2015) THE ALKB FAMILY OF FE(II)/ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASES: REPAIRING NUCLEIC ACID ALKYLATION DAMAGE AND BEYOND.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 290. ISSUE 34. P. 20734 -20742 65 72% 10
5 OUGLAND, R , ROGNES, T , KLUNGLAND, A , LARSEN, E , (2015) NON-HOMOLOGOUS FUNCTIONS OF THE ALKB HOMOLOGS.JOURNAL OF MOLECULAR CELL BIOLOGY. VOL. 7. ISSUE 6. P. 494 -504 75 64% 3
6 LIN, SB , CHOE, J , DU, P , TRIBOULET, R , GREGORY, RI , (2016) THE M(6)A METHYLTRANSFERASE METTL3 PROMOTES TRANSLATION IN HUMAN CANCER CELLS.MOLECULAR CELL. VOL. 62. ISSUE 3. P. 335 -345 32 82% 11
7 WANG, Y , ZHAO, JC , (2016) UPDATE: MECHANISMS UNDERLYING N-6-METHYLADENOSINE MODIFICATION OF EUKARYOTIC MRNA.TRENDS IN GENETICS. VOL. 32. ISSUE 12. P. 763 -773 54 79% 0
8 MEYER, KD , JAFFREY, SR , (2014) THE DYNAMIC EPITRANSCRIPTOME: N-6-METHYLADENOSINE AND GENE EXPRESSION CONTROL.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 15. ISSUE 5. P. 313 -326 48 53% 102
9 YUE, YN , LIU, JZ , HE, C , (2015) RNA N-6-METHYLADENOSINE METHYLATION IN POST-TRANSCRIPTIONAL GENE EXPRESSION REGULATION.GENES & DEVELOPMENT. VOL. 29. ISSUE 13. P. 1343 -1355 53 55% 30
10 SCHWARTZ, S , (2016) CRACKING THE EPITRANSCRIPTOME.RNA. VOL. 22. ISSUE 2. P. 169 -174 39 72% 7

Classes with closest relation at Level 1


Rank Class id link
1 3592 TRNA MODIFICATION//QUEUINE//RNA MODIFICATION
2 8755 FTO//FTO GENE//FAT MASS AND OBESITY ASSOCIATED GENE
3 1631 5 HYDROXYMETHYLCYTOSINE//DNA METHYLATION//5HMC
4 19084 TRNASE Z//TRNA NUCLEOTIDYLTRANSFERASE//CCA ADDING ENZYME
5 12584 ETHENO DNA ADDUCTS//ETHENO ADDUCTS//TOXICOL CANC RISK TORS
6 1097 MGMT//O 6 METHYLGUANINE DNA METHYLTRANSFERASE//O 6 ALKYLGUANINE DNA ALKYLTRANSFERASE
7 11597 RNA EDITING//ADAR//ADAR1
8 4461 SNORNA//SMALL NUCLEOLAR RNA//PRE RRNA PROCESSING
9 4391 DE NOVO METHYLATION//MYF 3//DNA METHYLATION
10 18004 INTERACTION PROPENSITY//PROTEIN RNA INTERACTIONS//DNA BINDING RESIDUES

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