Class information for:
Level 2: ISOPRENOID BIOSYNTHESIS//ISOPRENOIDS//TERPENE SYNTHASE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
1585 7221 36.3 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
680 3       HEVEA BRASILIENSIS//ISOPRENOID BIOSYNTHESIS//GUAYULE 8761
1585 2             ISOPRENOID BIOSYNTHESIS//ISOPRENOIDS//TERPENE SYNTHASE 7221
6968 1                   STEROL METHYLTRANSFERASE//STEROL C24 METHYLTRANSFERASE//ERGOSTEROL BIOSYNTHESIS 1423
7013 1                   TERPENE SYNTHASE//MONOTERPENE SYNTHASE//SESQUITERPENE SYNTHASE 1416
8024 1                   ISOPRENOID BIOSYNTHESIS//FOSMIDOMYCIN//ISOPENTENYL DIPHOSPHATE 1301
12077 1                   OXIDOSQUALENE CYCLASE//TRITERPENE SYNTHASE//SQUALENE HOPENE CYCLASE 933
13816 1                   HMG COA REDUCTASE//APOMINE//FOOD FUS COMPLEX 811
19056 1                   PRENYLTRANSFERASE//FARNESYL DIPHOSPHATE SYNTHASE//GERANYLGERANYL DIPHOSPHATE SYNTHASE 524
19834 1                   SQUALENE SYNTHASE//SQUALENE SYNTHASE INHIBITOR//ZARAGOZIC ACIDS 487
24016 1                   MEVALONATE DIPHOSPHATE DECARBOXYLASE//MEVALONATE PYROPHOSPHATE DECARBOXYLASE//MEVALONATE KINASE 326

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ISOPRENOID BIOSYNTHESIS authKW 385896 2% 75% 122
2 ISOPRENOIDS authKW 222817 3% 26% 202
3 TERPENE SYNTHASE authKW 220530 1% 63% 83
4 OXIDOSQUALENE CYCLASE authKW 200244 1% 82% 58
5 FOSMIDOMYCIN authKW 195053 1% 77% 60
6 ISOPENTENYL DIPHOSPHATE authKW 186668 1% 79% 56
7 PRENYLTRANSFERASE authKW 167760 1% 45% 88
8 SQUALENE SYNTHASE authKW 150109 1% 51% 69
9 1 DEOXY D XYLULOSE 5 PHOSPHATE REDUCTOISOMERASE authKW 141125 1% 90% 37
10 MEP PATHWAY authKW 123629 1% 55% 53

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 21825 46% 0% 3346
2 Plant Sciences 10020 17% 0% 1263
3 Chemistry, Organic 4908 13% 0% 949
4 Biophysics 4794 10% 0% 741
5 Chemistry, Medicinal 4073 8% 0% 557
6 Chemistry, Multidisciplinary 1130 11% 0% 797
7 Biotechnology & Applied Microbiology 743 6% 0% 418
8 Microbiology 548 5% 0% 370
9 Nutrition & Dietetics 384 3% 0% 185
10 Entomology 380 2% 0% 161

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LEHRSTUHL ORGAN CHEM BIOCHEM 41052 1% 22% 44
2 ISOPRENOIDES 40572 0% 80% 12
3 BIOL MAT CHEM 23009 0% 78% 7
4 BIOCHEM BIOPHYS MOL BIOL 20335 1% 7% 66
5 GENET PHYSIOL MOL 17610 0% 83% 5
6 BIOL MOL PLANTES 16179 1% 7% 58
7 PROGRAM PL LIFE CHEM 15925 0% 54% 7
8 LE BEL 14555 1% 7% 48
9 FOOD FUS COMPLEX 13524 0% 80% 4
10 MJ MURDOCK METABOL 13516 0% 40% 8

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHYTOCHEMISTRY 22316 5% 2% 345
2 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 12716 3% 1% 229
3 LIPIDS 12300 2% 2% 132
4 PESTICIDE SCIENCE 7076 1% 3% 62
5 PLANT PHYSIOLOGY 4817 2% 1% 159
6 JOURNAL OF PESTICIDE SCIENCE 3489 1% 2% 41
7 JOURNAL OF BIOLOGICAL CHEMISTRY 3040 5% 0% 358
8 JOURNAL OF ANTIBIOTICS 2990 1% 1% 70
9 NATURAL PRODUCT REPORTS 2643 0% 2% 30
10 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 2447 3% 0% 249

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ISOPRENOID BIOSYNTHESIS 385896 2% 75% 122 Search ISOPRENOID+BIOSYNTHESIS Search ISOPRENOID+BIOSYNTHESIS
2 ISOPRENOIDS 222817 3% 26% 202 Search ISOPRENOIDS Search ISOPRENOIDS
3 TERPENE SYNTHASE 220530 1% 63% 83 Search TERPENE+SYNTHASE Search TERPENE+SYNTHASE
4 OXIDOSQUALENE CYCLASE 200244 1% 82% 58 Search OXIDOSQUALENE+CYCLASE Search OXIDOSQUALENE+CYCLASE
5 FOSMIDOMYCIN 195053 1% 77% 60 Search FOSMIDOMYCIN Search FOSMIDOMYCIN
6 ISOPENTENYL DIPHOSPHATE 186668 1% 79% 56 Search ISOPENTENYL+DIPHOSPHATE Search ISOPENTENYL+DIPHOSPHATE
7 PRENYLTRANSFERASE 167760 1% 45% 88 Search PRENYLTRANSFERASE Search PRENYLTRANSFERASE
8 SQUALENE SYNTHASE 150109 1% 51% 69 Search SQUALENE+SYNTHASE Search SQUALENE+SYNTHASE
9 1 DEOXY D XYLULOSE 5 PHOSPHATE REDUCTOISOMERASE 141125 1% 90% 37 Search 1+DEOXY+D+XYLULOSE+5+PHOSPHATE+REDUCTOISOMERASE Search 1+DEOXY+D+XYLULOSE+5+PHOSPHATE+REDUCTOISOMERASE
10 MEP PATHWAY 123629 1% 55% 53 Search MEP+PATHWAY Search MEP+PATHWAY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 HEMMERLIN, A , HARWOOD, JL , BACH, TJ , (2012) A RAISON D'ETRE FOR TWO DISTINCT PATHWAYS IN THE EARLY STEPS OF PLANT ISOPRENOID BIOSYNTHESIS?.PROGRESS IN LIPID RESEARCH. VOL. 51. ISSUE 2. P. 95 -148 397 55% 76
2 DEGENHARDT, J , KOLLNER, TG , GERSHENZON, J , (2009) MONOTERPENE AND SESQUITERPENE SYNTHASES AND THE ORIGIN OF TERPENE SKELETAL DIVERSITY IN PLANTS.PHYTOCHEMISTRY. VOL. 70. ISSUE 15-16. P. 1621-1637 146 83% 237
3 THOLL, D , (2015) BIOSYNTHESIS AND BIOLOGICAL FUNCTIONS OF TERPENOIDS IN PLANTS.BIOTECHNOLOGY OF ISOPRENOIDS. VOL. 148. ISSUE . P. 63 -106 171 64% 19
4 MASINI, T , HIRSCH, AKH , (2014) DEVELOPMENT OF INHIBITORS OF THE 2C-METHYL-D-ERYTHRITOL 4-PHOSPHATE (MEP) PATHWAY ENZYMES AS POTENTIAL ANTI-INFECTIVE AGENTS.JOURNAL OF MEDICINAL CHEMISTRY. VOL. 57. ISSUE 23. P. 9740 -9763 145 87% 10
5 BROWN, GD , (1998) THE BIOSYNTHESIS OF STEROIDS AND TRITERPENOIDS.NATURAL PRODUCT REPORTS. VOL. 15. ISSUE 6. P. 653 -696 492 38% 45
6 GAO, Y , HONZATKO, RB , PETERS, RJ , (2012) TERPENOID SYNTHASE STRUCTURES: A SO FAR INCOMPLETE VIEW OF COMPLEX CATALYSIS.NATURAL PRODUCT REPORTS. VOL. 29. ISSUE 10. P. 1153 -1175 113 93% 65
7 DICKSCHAT, JS , (2016) BACTERIAL TERPENE CYCLASES.NATURAL PRODUCT REPORTS. VOL. 33. ISSUE 1. P. 87 -110 105 88% 4
8 EISENREICH, W , BACHER, A , ARIGONI, D , ROHDICH, F , (2004) BIOSYNTHESIS OF ISOPRENOIDS VIA THE NON-MEVALONATE PATHWAY.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 61. ISSUE 12. P. 1401-1426 136 81% 306
9 REHMAN, R , HANIF, MA , MUSHTAQ, Z , AL-SADI, AM , (2016) BIOSYNTHESIS OF ESSENTIAL OILS IN AROMATIC PLANTS: A REVIEW.FOOD REVIEWS INTERNATIONAL. VOL. 32. ISSUE 2. P. 117 -160 155 68% 1
10 KUMARI, S , PRIYA, P , MISRA, G , YADAV, G , (2013) STRUCTURAL AND BIOCHEMICAL PERSPECTIVES IN PLANT ISOPRENOID BIOSYNTHESIS.PHYTOCHEMISTRY REVIEWS. VOL. 12. ISSUE 2. P. 255 -291 158 68% 12

Classes with closest relation at Level 2


Rank Class id link
1 2916 OXYSTEROLS//CHOLESTEROL OXIDES//CHOLESTEROL OXIDATION PRODUCTS
2 3440 HEVEA BRASILIENSIS//GUAYULE//PARTHENIUM ARGENTATUM
3 4053 AGARWOOD//AQUILARIA SINENSIS//POGOSTEMON CABLIN
4 3244 COENZYME Q10//UBIQUINONE//COENZYME Q
5 1905 AGROBACTERIUM RHIZOGENES//HAIRY ROOTS//CATHARANTHUS ROSEUS
6 1911 FARNESYLTRANSFERASE//RAS//RAL
7 2238 ORGANIC GEOCHEMISTRY//MARINE ORGAN BIOGEOCHEM//ALKENONES
8 1304 CLOSTRIDIUM ACETOBUTYLICUM//1 3 PROPANEDIOL//2 3 BUTANEDIOL
9 2141 FATTY ACID SYNTHASE//LIVER X RECEPTOR//LXR
10 2335 CUPRESSACEAE//PINACEAE//POLYGODIAL

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