Hoppa till huvudinnehållet
Till KTH:s startsida Till KTH:s startsida

FCB3203 Biocatalysis for Doctoral Students 4.0 hp

Course memo Spring 2022-60401

Version 1 – 10/19/2021, 5:46:47 PM

Course offering

Spring 2022-1 (Start date 18/01/2022, English)

Language Of Instruction

English

Offered By

CBH/Industrial Biotechnology

Course memo Spring 2022

Course presentation

This is an online course providing knowledge and skills in the area of enzyme technology with a focus on replacing chemical synthesis techniques by bio-based alternatives (biocatalysis) using enzymes.

The course is an introduction to the field of industrial biocatalysis. 

Sign up to the course by sending an e-mail to the course coordinator.

Headings denoted with an asterisk ( * ) is retrieved from the course syllabus version Spring 2022

Content and learning outcomes

Course contents

The course provides an overview of the research area Biocatalysis, with special emphasis on the application of enzymes for environmentally sustainable production of chemical products.

Relevant enzymes and their reaction mechanisms are discussed. Furthermore, central experimental techniques for the use of enzymes in organic solvents are discussed, as well as methods for optimizing stereochemical yields with industrial processes as examples.

Furthermore, the course provides knowledge about general and current techniques for design and modification of enzymes, for example directed evolution, for application in biocatalysis. The student carries out a project where a theoretical experiment is designed which includes, among other things, to select and justify choice of methods for experiment execution and analysis of results.

Intended learning outcomes

After completion of the course the student shall be able to

  • demonstrate in-depth knowledge and analytical skills in the field of biocatalysis
  • demonstrate good ability to explain and analyze complex concepts in biocatalysis based on relevant research literature, and in a pedagogical way communicate the knowledge in writing
  • formulate and discuss in writing how biocatalysis can be applied in industry to create more environmentally sustainable biotechnological and chemical processes and, to reflect on sustainable societal development

Learning activities

The course contains a lecture series arranged jointly with the Masters' course BB2460 Biocatalysis. The lectures are mainly pre-recorded and should be watched prior to each of the scheduled lectures, where discussions and problem-solving are the major activities. Apart from the lecture series, the course contains an individual theoretical research project presented in a report. 

The schedule for the lectures/discussions are published around mid december. Search for the schedule for the course BB2460 here: https://intra.kth.se/en/utbildning/tentamen-och-schema/sok-schema-1.279132 

Detailed plan

Learning activities Content Preparations
Lecture 1 Registration & Introduction Pre-recorded material, articles and slides.
Lecture 2 Fine Chemicals Pre-recorded material, articles and slides.
Lecture 3 Kinetic Resolution & Enantioselectivity Pre-recorded material, articles and slides.
Lecture 4 Enzyme Mechanisms Pre-recorded material, articles and slides.
Lecture 5 Hydrolases Pre-recorded material, articles and slides.
Lecture 6 Oxidoreductases Pre-recorded material, articles and slides.
Lecture 7 Transferases, Lyases, Isomerases & Ligases Pre-recorded material, articles and slides.
Lecture 8 Organic Solvents & Water Activity Pre-recorded material, articles and slides.
Lecture 9 Enzyme Engineering Strategies Pre-recorded material, articles and slides.
Lecture 10 Immobilisation & Biocatalysis at a company Pre-recorded material, articles and slides.
Lectuere 11 Cascade Biocatalysis Pre-recorded material, articles and slides.
Submit report    

Preparations before course start

Recommended prerequisites

Courses in organic chemistry and/or biochemistry at the second cycle.

Literature

The compulsory course literature consist of a few scientific review articles selected for each of the lectures in the course. These articles can be found through links provided for each lecture in Canvas. No compulsory text book is used but there are several optional books:

  • Kurt Faber. Biotransformations in Organic Chemistry:  A Textbook, 7th Edition. Springer-Verlag:  Heidelberg. 2018. e-ISBN 978-3-319-61590-5. Available as e-book through the KTH Library.
  • Andreas Liese, Karsten Seelbach, Christian Wandrey (Eds.). Industrial Biotransformations. 2nd ed. Wiley-VCH. 2006. e-ISBN: 9783527608188. DOI: 10.1002/3527608184. Available as e-book through the KTH Library.
  • Bommarius & Riebel, Biocatalysis - Fundamentals and Applications, Wiley-VCH 2004. e-ISBN: 9783527602360. Available as e-book through the KTH Library.
  • Silverman, R. B. The Organic Chemistry of Enzyme-Catalyzed Reactions, Academic Press. 2002. ISBN 978-0-08-051336-2. Available as e-book through the KTH Library.
  • Peter Grunwald, BIOCATALYSIS - Biochemical Fundamentals and Applications, Imperial College Press 2009. ISBN 978-1-86094-771-1 (used as course text book 2012)
  • Adrie J. J. Straathof, Patrick Adlercreutz (Eds.) Applied biocatalysis. 2nd Taylor & Francis 2000

Examination and completion

Grading scale

P, F

Examination

  • INL1 - Hand in assignment, 1.0 credits, Grading scale: P, F
  • PRO1 - Project, 3.0 credits, Grading scale: P, F

Based on recommendation from KTH’s coordinator for disabilities, the examiner will decide how to adapt an examination for students with documented disability.

The examiner may apply another examination format when re-examining individual students.

The section below is not retrieved from the course syllabus:

Hand in assignment ( INL1 )

This part is assessed through reflection tasks based on the precorded videos and handed in before each of the lectures and participation in the scheduled lectures/discussions. Active participation in 80% of the lectures is required.

Project ( PRO1 )

This part is assessed by a written individual project report.

Other requirements for final grade

For the final grade, an approved written project report is required. Furthermore, 80% active participation in scheduled lectures and a passing grade on associated in-depth assignments that take the form of a reflective and critically examining analysis of selected research work in the field of biocatalysis are required.

Ethical approach

  • All members of a group are responsible for the group's work.
  • In any assessment, every student shall honestly disclose any help received and sources used.
  • In an oral assessment, every student shall be able to present and answer questions about the entire assignment and solution.

Further information

No information inserted

Round Facts

Start date

Missing mandatory information

Course offering

  • Spring 2022-60401

Language Of Instruction

English

Offered By

CBH/Industrial Biotechnology

Contacts

Course Coordinator

Teachers

Examiner