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FSK3517 Simulations of Cellular Biophysics with Virtualcell 4.0 credits

Course offerings are missing for current or upcoming semesters.
Headings with content from the Course syllabus FSK3517 (Autumn 2018–) are denoted with an asterisk ( )

Content and learning outcomes

Course contents

The course will provide skills in using the virtual cell simulation and modeling environment. Virtual Cell is a NIH-initiated tool for modeling and analysis in cell biology developed at the National Resource Center for Cell Analysis and Modeling at Univ of Connecticut

Intended learning outcomes

The aim of the course is for the student to be able to use Virtual Cell to explain and illustrate complex relationships between different control systems in a cell. In addition, the student should be able to analyze and predict how a change in the control system will affect the cell response and design attempts with living cells to test the prediction.

Literature and preparations

Specific prerequisites

The student should be enrolled to PhD studies.

Recommended prerequisites

No information inserted

Equipment

No information inserted

Literature

Artcles as well as online material from NRCCAM

Examination and completion

If the course is discontinued, students may request to be examined during the following two academic years.

Grading scale

G

Examination

  • RAP1 - Report, 2.0 credits, grading scale: P, F
  • SEM1 - Seminar, 2.0 credits, grading scale: P, F

Based on recommendation from KTH’s coordinator for disabilities, the examiner will decide how to adapt an examination for students with documented disability.

The examiner may apply another examination format when re-examining individual students.

SEM1) Seminar, 2.0 credits, grading scale: P/F;

RAP1) Report, 2.0 credits, grading scale: P/F;

Other requirements for final grade

Seminar and written report

Opportunity to complete the requirements via supplementary examination

No information inserted

Opportunity to raise an approved grade via renewed examination

No information inserted

Examiner

Ethical approach

  • All members of a group are responsible for the group's work.
  • In any assessment, every student shall honestly disclose any help received and sources used.
  • In an oral assessment, every student shall be able to present and answer questions about the entire assignment and solution.

Further information

Course room in Canvas

Registered students find further information about the implementation of the course in the course room in Canvas. A link to the course room can be found under the tab Studies in the Personal menu at the start of the course.

Offered by

Main field of study

This course does not belong to any Main field of study.

Education cycle

Third cycle

Add-on studies

No information inserted

Contact

Hjalmar Brismar, brismar@kth.se

Postgraduate course

Postgraduate courses at SCI/Applied Physics