Publications by Peter Savolainen
Peer reviewed
Articles
[1]
S. Z. Wang et al., "Historic dog Furs Unravel the Origin and Artificial Selection of Modern Nordic Lapphund and Elkhound dog Breeds," Molecular biology and evolution, vol. 41, no. 7, 2024.
[2]
J. R.S. Meadows et al., "Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture," Genome Biology, vol. 24, no. 1, 2023.
[3]
Q. K. Thai et al., "HV1 mtDNA Reveals the High Genetic Diversity and the Ancient Origin of Vietnamese Dogs," Animals, vol. 13, no. 6, pp. 1036, 2023.
[4]
W. L. Li et al., "Multiple Origins and Genomic Basis of Complex Traits in Sighthounds," Molecular biology and evolution, vol. 40, no. 8, 2023.
[5]
P. Sahlén et al., "Variants That Differentiate Wolf and Dog Populations Are Enriched in Regulatory Elements," Genome Biology and Evolution, vol. 13, no. 4, 2021.
[6]
L. Zhang et al., "Complete Range of the Universal mtDNA Gene Pool and High Genetic Diversity in the Thai Dog Population," Genes, vol. 11, no. 3, 2020.
[7]
S.-J. Zhang et al., "Genomic regions under selection in the feralization of the dingoes," Nature Communications, vol. 11, no. 1, 2020.
[8]
X. Wang et al., "Canine transmissible venereal tumor genome reveals ancient introgression from coyotes to pre-contact dogs in North America," Cell Research, vol. 29, no. 7, pp. 592-595, 2019.
[9]
E. A. Ostrander et al., "Dog10K : An international sequencing effort to advance studies of canine domestication, phenotypes and health," National Science Review, vol. 6, no. 4, pp. 810-824, 2019.
[10]
T. Ning et al., "Local origin or external input : modern horse origin in East Asia," BMC Evolutionary Biology, vol. 19, no. 1, 2019.
[11]
B. P. Smith et al., "Taxonomic status of the Australian dingo : the case for Canis dingo Meyer, 1793," Zootaxa, vol. 4564, no. 1, pp. 173-197, 2019.
[12]
C. Tepeli et al., "Some morphological characteristics of Turkish shepherd dogs raised in breeder conditions various countries : Çeşitli ülkelerde halk elinde yetiştirilen Türk Çoban Köpeklerinde bazı morfolojik özellikler," Eurasian Journal of Veterinary Sciences, vol. 33, no. 4, pp. 268-275, 2017.
[13]
M. Arendt et al., "Diet adaptation in dog reflects spread of prehistoric agriculture," Heredity, vol. 117, no. 5, pp. 301-306, 2016.
[14]
E. Ersmark et al., "From the Past to the Present : Wolf Phylogeography and Demographic History Based on the Mitochondrial Control Region," Frontiers in Ecology and Evolution, vol. 4, 2016.
[15]
G.-D. Wang et al., "Out of southern East Asia : the natural history of domestic dogs across the world," Cell Research, vol. 26, no. 1, pp. 21-33, 2016.
[16]
G.-D. Wang et al., "Questioning the evidence for a Central Asian domestication origin of dogs," Proceedings of the National Academy of Sciences of the United States of America, vol. 113, no. 19, pp. E2554-E2555, 2016.
[17]
L. Wang et al., "The geographical distribution of grey wolves (Canis lupus) in China : a systematic review," Zoological Research, vol. 37, no. 6, pp. 315-326, 2016.
[18]
A. Ardalan et al., "African origin for Madagascan dogs revealed by mtDNA analysis," Royal Society Open Science, 2015.
[19]
H. Angleby et al., "Forensic Informativity of similar to 3000bp of Coding Sequence of Domestic Dog mtDNA," Journal of Forensic Sciences, vol. 59, no. 4, pp. 898-908, 2014.
[20]
A. Kahles et al., "Excap : maximization of haplotypic diversity of linked markers," PLOS ONE, vol. 8, no. 11, pp. e79012, 2013.
[21]
P. Savolainen, "Extensive phenotypic diversity among South Chinese dogs," ISRN Evolutionary Biology, vol. 2013, no. Article ID 621836, 2013.
[22]
M. Erdogan et al., "Genetic variability among native dog breeds in Turkey," Turkish Journal of Biology, vol. 37, no. 2, pp. 176-183, 2013.
[23]
A. K. Niskanen et al., "MHC variability supports dog domestication from a large number of wolves : high diversity in Asia," Heredity, vol. 110, no. 1, pp. 80-85, 2013.
[24]
B. van Asch et al., "Pre-Columbian origins of Native American dog breeds, with only limited replacement by European dogs, confirmed by mtDNA analysis," Proceedings of the Royal Society of London. Biological Sciences, vol. 280, no. 1766, pp. 20131142, 2013.
[25]
G.-D. Wang et al., "The genomics of selection in dogs and the parallel evolution between dogs and humans," Nature Communications, vol. 4, pp. 1860, 2013.
[26]
M. C. R. Oskarsson et al., "Mitochondrial DNA data indicate an introduction through Mainland Southeast Asia for Australian dingoes and Polynesian domestic dogs," Proceedings of the Royal Society of London. Biological Sciences, vol. 279, no. 1730, pp. 967-974, 2012.
[27]
A. Ardalan et al., "Narrow genetic basis for the Australian dingo confirmed through analysis of paternal ancestry," Genetica, vol. 140, no. 1-3, pp. 65-73, 2012.
[28]
Z. L. Ding et al., "Origins of domestic dog in Southern East Asia is supported by analysis of Y-chromosome DNA," Heredity, vol. 108, no. 5, pp. 507-514, 2012.
[29]
A. Ardalan et al., "Comprehensive study of mtDNA among Southwest Asian dogs contradicts independent domestication of wolf, but implies dog–wolf hybridization," Ecology and Evolution, vol. 1, no. 3, pp. 373-385, 2011.
[30]
M. Neiman et al., "Decoding a substantial set of samples in parallel by massive sequencing," Plos One, vol. 6, no. 3, 2011.
[31]
C. Klütsch et al., "Regional occurrence, high frequency but low diversity of mitochondrial DNA haplogroup d1 suggests a recent dog-wolf hybridization in Scandinavia," Animal Genetics, vol. 42, no. 1, pp. 100-103, 2011.
[32]
C. Klütsch et al., "Segregation of point mutation heteroplasmy in the control region of dog mtDNA studied systematically in deep generation pedigrees," International journal of legal medicine, vol. 125, no. 4, pp. 527-535, 2011.
[33]
A.-B. Zhang and P. Savolainen, "BPSI2.0 : a C/C++ interface program for species identification via DNA barcoding with a BP-neural network by calling the Matlab engine," , vol. 9, no. 1, pp. 104-106, 2009.
[34]
E. Koban et al., "Genetic relationship between Kangal, Akbash and other dog populations," Discrete Applied Mathematics, vol. 157, no. 10, pp. 2335-2340, 2009.
[35]
A. Tellgren-Roth et al., "Keeping the blood flowing-plasminogen activator genes and feeding behavior in vampire bats," Die Naturwissenschaften, vol. 96, no. 1, pp. 39-47, 2009.
[36]
J.-F. Pang et al., "mtDNA Data Indicate a Single Origin for Dogs South of Yangtze River, Less Than 16,300 Years Ago, from Numerous Wolves," Molecular biology and evolution, vol. 26, no. 12, pp. 2849-2864, 2009.
[37]
C.-J. Rubin et al., "Differential gene expression in femoral bone from red junglefowl and domestic chicken, differing for bone phenotypic traits," BMC Genomics, vol. 8, pp. 208, 2007.
[38]
N. H. C. S. Hillbertz et al., "Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs," Nature Genetics, vol. 39, no. 11, pp. 1318-1320, 2007.
[39]
C. Natanaelsson et al., "Dog Y chromosomal DNA sequence : identification, sequencing and SNP discovery," BMC Genetics, vol. 7, 2006.
[40]
S. Guo et al., "Origin of mitochondrial DNA diversity of domestic yaks," BMC Evolutionary Biology, vol. 6, 2006.
[41]
P. Savolainen et al., "ESTs from brain and testis of White Leghorn and red junglefowl : annotation, bioinformatic classification of unknown transcripts and analysis of expression levels," Cytogenetic and Genome Research, vol. 111, no. 1, pp. 79-87, 2005.
[42]
L. Arvestad et al., "Expressed sequence tags from the midgut and an epithelial cell line of Chironomus tentans : annotation, bioinformatic classification of unknown transcripts and analysis of expression levels," Insect molecular biology (Print), vol. 14, no. 6, pp. 689-695, 2005.
[43]
H. Angleby and P. Savolainen, "Forensic informativity of domestic dog mtDNA control region sequences," Forensic Science International, vol. 154, no. 03-feb, pp. 99-110, 2005.
[44]
K. Coward et al., "Phospholipase C zeta, the trigger of egg activation in mammals, is present in a non-mammalian species," Reproduction, vol. 130, no. 2, pp. 157-163, 2005.
[45]
P. Savolainen et al., "A detailed picture of the origin of the Australian dingo, obtained from the study of mitochondrial DNA," Proceedings of the National Academy of Sciences of the United States of America, vol. 101, no. 33, pp. 12387-12390, 2004.
[46]
C. J. Fitzsimmons et al., "Detection of sequence polymorphisms in red junglefowl and White Leghorn ESTs," Animal Genetics, vol. 35, no. 5, pp. 391-396, 2004.
[47]
A. Tellgren et al., "Myostatin rapid sequence evolution in ruminants predates domestication," Molecular Phylogenetics and Evolution, vol. 33, no. 3, pp. 782-790, 2004.
[48]
P. Savolainen et al., "Genetic evidence for an East Asian origin of domestic dogs," Science, vol. 298, no. 5598, pp. 1610-1613, 2002.
[49]
P. Savolainen, L. Arvestad and J. Lundeberg, "A novel method for forensic DNA investigations : Repeat-type sequence analysis of tandemly repeated mtDNA in domestic dogs," Journal of Forensic Sciences, vol. 45, no. 5, pp. 990-999, 2000.
[50]
P. Savolainen, L. Arvestad and J. Lundeberg, "mtDNA tandem repeats in domestic dogs and wolves : Mutation mechanism studied by analysis of the sequence of imperfect repeats," Molecular biology and evolution, vol. 17, no. 4, pp. 474-488, 2000.
[51]
P. Savolainen and J. Lundeberg, "Forensic evidence based on mtDNA from dog and wolf hairs," Journal of Forensic Sciences, vol. 44, no. 1, pp. 77-81, 1999.
[52]
C. Vila et al., "Multiple and ancient origins of the domestic dog," Science, vol. 276, no. 5319, pp. 1687-1689, 1997.
[53]
P. Savolainen et al., "Sequence analysis of domestic dog mitochondrial DNA for forensic use," Journal of Forensic Sciences, vol. 42, no. 4, pp. 593-600, 1997.
[54]
A. Sajantila et al., "Paternal and maternal DNA lineages reveal a bottleneck in the founding of the Finnish population," Proceedings of the National Academy of Sciences of the United States of America, vol. 93, no. 21, pp. 12035-12039, 1996.
[55]
H. Ellegren, P. Savolainen and B. Rosen, "The genetical history of an isolated population of the endangered grey wolf Canis lupus : A study of nuclear and mitochondrial polymorphisms," Philosophical Transactions of the Royal Society of London. Biological Sciences, vol. 351, no. 1348, pp. 1661-1669, 1996.
Conference papers
[56]
S. Ka et al., "Expression analysis of growth and energy regulation-associated genes in two divergent chicken strains," in Trends in Comparative Endocrinology and Neurobiology, 2005, pp. 357-359.
Chapters in books
[57]
P. Savolainen, "Domestication of dogs," in The Behavioural Biology of Dogs, : CABI Publishing, 2007, pp. 21-37.
Non-peer reviewed
Articles
[58]
M. Nizamlioglu et al., "Genetic characterization of Akbas shepherd dogs in Turkey, Uzbekistan and Iran using STR markers," The FEBS Journal, vol. 279, pp. 349-349, 2012.
[59]
Z. Bulut et al., "Microsatellite analysis of Kangal shepherd dogs in Turkey, Uzbekistan, Ajerbaijan and Iran," The FEBS Journal, vol. 279, pp. 349-349, 2012.
Theses
[60]
P. Savolainen, "Mitochondrial DNA : analysis of the control region in forensic and population genetic studies," Doctoral thesis Stockholm : KTH, 1999.
Other
[61]
[62]
M. Dezfouli et al., "Massively Parallel MHC-Typing by Sequencing RevealedNovel Variants of Canine Leukocyte Antigen," (Manuscript).
[63]
B. van Asch et al., "MtDNA analysis confirms early Pre‐Colombian origins of Native Americandogs," (Manuscript).
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2024-09-08 04:09:21