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Cell factory genomics

The cell factory genomics group provides high throughput DNA sequencing on mulitple platforms (Illumina, Ion Torrent and PacBio) in collaboration with the National Genomics Infrastructure in Sweden. It provides customized data analyses for all types of applications to extract biologically relevant results from raw sequencing data.

Group members

  • Björn Hallström, Co-PI, PhD

Publications

  • Kildegaard  KR, Hallström BM, Blicher TH, Sonnenschein N, Jensen NB, Sherstyk S, Harrison SJ, Maury J, Herrgård MJ, Juncker AS, Förster J, Nielsen JB, Borodina I. 2014. Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance. Metabol Eng 26:57-66.
  • Caspeta L, Chen Y, Ghiaci P, Feizi A, Bustov S, Hallström BM, Petranovic D, Nielsen J. 2014. Altered sterol composition renders yeast thermotolerant. Science 346:75-78
  • Jarmander J, Hallström BM, Larsson G. 2014. Simultaneous uptake of lignocellulose-based monosaccharides by Escherichia coli. Biotech and bioeng 111:1108-1115.
  • Anfelt J, Hallström B, Nielsen J, Uhlén M, Hudson EP. 2014. Using Transcriptomics To Improve Butanol Tolerance of Synechocystis sp. Strain PCC 6803. Appl Environ Microbiol 79:7419-7427.